src/hg/utils/refreshNamedSessionCustomTracks/refreshSessionCtFilesInner.csh 1.2
1.2 2009/09/25 17:48:07 angie
Adding uptime command after error/warning messages so we can see whether load is high.
Index: src/hg/utils/refreshNamedSessionCustomTracks/refreshSessionCtFilesInner.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/utils/refreshNamedSessionCustomTracks/refreshSessionCtFilesInner.csh,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 4 -r1.1 -r1.2
--- src/hg/utils/refreshNamedSessionCustomTracks/refreshSessionCtFilesInner.csh 25 Sep 2009 00:34:31 -0000 1.1
+++ src/hg/utils/refreshNamedSessionCustomTracks/refreshSessionCtFilesInner.csh 25 Sep 2009 17:48:07 -0000 1.2
@@ -19,21 +19,24 @@
if (-e $tmpLog || -e $tmpOut) then
echo "ERROR: $tmpLog and/or $tmpOut already exists! Is another instance running?"
echo " Or does the file simply need to be cleaned up since yesterday? Aborting."
+ uptime
exit 1
endif
set strayLogs = `find $logDir -maxdepth 1 -name tmp\*.log`
if ($strayLogs != "") then
echo "WARNING: stray log files (is a previous instance still running?)"
echo $strayLogs
+ uptime
endif
set strayOut = `find $tmpOut:h -maxdepth 1 -name ctDoNoRmNext\*`
if ($strayOut != "") then
echo "WARNING: stray temporary output files (is a previous instance still running?)"
echo $strayOut
+ uptime
endif
ps -eafl > $logDir/before.log
/cluster/bin/x86_64/refreshNamedSessionCustomTracks hgcentral -verbose=4 \