src/hg/encode/DAFs/BroadChipSeq.daf 1.1
1.1 2009/09/22 20:53:54 tdreszer
Broad DAFs need to be checked in and need to use dafVersion 1.1
Index: src/hg/encode/DAFs/BroadChipSeq.daf
===================================================================
RCS file: src/hg/encode/DAFs/BroadChipSeq.daf
diff -N src/hg/encode/DAFs/BroadChipSeq.daf
--- /dev/null 1 Jan 1970 00:00:00 -0000
+++ src/hg/encode/DAFs/BroadChipSeq.daf 22 Sep 2009 20:53:54 -0000 1.1
@@ -0,0 +1,39 @@
+# Data Agreement File for Broad ChipSeq project $Revision$
+
+# This file specifies the data agreement between your lab and
+# the DCC. It should not be changed unilaterally.
+
+ # Lab and general info
+ grant Bernstein
+ lab Broad
+ dataType ChipSeq
+ variables cell, antibody
+ assembly hg18
+ dafVersion 1.1
+ dataVersion 1
+ medianFragmentLength 300
+ validationSettings validateFiles.tagAlign:mmCheckOneInN=100,mismatches=3,nMatch,matchFirst=25
+
+ # Track/view definition
+ view Peaks
+ longLabelPrefix Histone Mods, Broad ChIP-seq Peaks
+ type broadPeak
+ hasReplicates no
+ required yes
+
+ view Signal
+ longLabelPrefix Histone Mods, Broad ChIP-seq Signal
+ type wig
+ hasReplicates no
+ required yes
+
+ view Alignments
+ longLabelPrefix Histone Mods, Broad ChIP-seq Alignments
+ type tagAlign
+ hasReplicates yes
+ required yes
+
+ view RawData
+ type fastq
+ hasReplicates yes
+ required yes