src/hg/encode/DAFs/UwChIPseq.daf 1.2
1.2 2009/09/22 19:03:20 tdreszer
UW should provide replicates for peaks to be consistent
Index: src/hg/encode/DAFs/UwChIPseq.daf
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/DAFs/UwChIPseq.daf,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/encode/DAFs/UwChIPseq.daf 21 Sep 2009 18:41:03 -0000 1.1
+++ src/hg/encode/DAFs/UwChIPseq.daf 22 Sep 2009 19:03:20 -0000 1.2
@@ -1,50 +1,50 @@
# Data Agreement File for ChIP-seq project $Revision$
# This file specifies the data agreement between your lab and
# the DCC. It should not be changed unilaterally.
# Lab and general info
grant Stam
lab Uw
dataType ChIPSeq
variables cell, antibody
assembly hg18
dafVersion 1.1
dataVersion 1
validationSettings validateFiles.tagAlign:mmCheckOneInN=100,mismatches=2
# Track/view definition
view Hotspots
longLabelPrefix UW ChIP-Seq Hotspots
type broadPeak
required no
hasReplicates yes
view Peaks
longLabelPrefix UW ChIP-seq Peaks
type narrowPeak
required yes
-hasReplicates no
+hasReplicates yes
view Signal
longLabelPrefix UW ChIP-seq Pooled Signal
type wig
required no
hasReplicates no
view RawSignal
longLabelPrefix UW ChIP-Seq Raw Signal
type wig
required no
hasReplicates yes
view Alignments
longLabelPrefix UW ChIP-seq Sites
type tagAlign
required yes
hasReplicates yes
view RawData
type fastq
required yes
hasReplicates yes