src/hg/lib/bed12wSeq.sql 1.1

Index: src/hg/lib/bed12wSeq.sql
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RCS file: src/hg/lib/bed12wSeq.sql
diff -N src/hg/lib/bed12wSeq.sql
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/lib/bed12wSeq.sql	24 Sep 2009 21:26:52 -0000	1.1
@@ -0,0 +1,24 @@
+# bed12wSeq.sql was originally generated by the autoSql program, which also 
+# generated bed12wSeq.c and bed12wSeq.h.  This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly 
+# automatic way.
+
+#Browser extensible data (12 fields) plus two sequences
+CREATE TABLE bed12wSeq (
+    chrom varchar(255) not null,	# Chromosome (or contig, scaffold, etc.)
+    chromStart int unsigned not null,	# Start position in chromosome
+    chromEnd int unsigned not null,	# End position in chromosome
+    name varchar(255) not null,	# Name of item
+    score int unsigned not null,	# Score from 0-1000
+    strand char(1) not null,	# + or -
+    thickStart int unsigned not null,	# Start of where display should be thick (start codon)
+    thickEnd int unsigned not null,	# End of where display should be thick (stop codon)
+    reserved int unsigned not null,	# Used as itemRgb as of 2004-11-22
+    blockCount int not null,	# Number of blocks
+    blockSizes longblob not null,	# Comma separated list of block sizes
+    chromStarts longblob not null,	# Start positions relative to chromStart
+    seq1 varchar(255) not null,	# sequence 1, normally left paired end
+    seq2 varchar(255) not null,	# sequence 2, normally right paired end
+              #Indices
+    PRIMARY KEY(chrom)
+);