src/hg/lib/makefile 1.397

Index: src/hg/lib/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/lib/makefile,v
retrieving revision 1.396
retrieving revision 1.397
diff -b -B -U 4 -r1.396 -r1.397
--- src/hg/lib/makefile	24 Sep 2009 21:01:21 -0000	1.396
+++ src/hg/lib/makefile	24 Sep 2009 21:22:42 -0000	1.397
@@ -5,9 +5,9 @@
     affyOffset.o affyPairs.o agp.o agpFrag.o agpGap.o alignSeqSizes.o altGraph.o \
     altGraphX.o ancientRref.o atomDb.o  axtInfo.o \
     axtLib.o bactigPos.o bamFile.o baseMaskCommon.o bdgpExprLink.o bdgpGeneInfo.o \
     bed.o bed5FloatScore.o bed5Pval.o bed6FloatScore.o bed12Source.o \
-    bedCart.o bgiGeneInfo.o bgiGeneSnp.o bgiSnp.o bioImage.o \
+    bed12wSeq.o bedCart.o bgiGeneInfo.o bgiGeneSnp.o bgiSnp.o bioImage.o \
     blastTab.o blastzNet.o blatServers.o borf.o borkPseudoHom.o botDelay.o\
     cart.o cartDb.o cdsEvidence.o cdsOrtho.o cdsPick.o cdsSpec.o \
     ccdsInfo.o ccdsGeneMap.o celeraCoverage.o \
     celeraDupPositive.o cgapSage/cgapSage.o cgapSage/cgapSageLib.o cgh.o chainCart.o \
@@ -27,8 +27,9 @@
     encode/encodeErge.o encode/encodeErgeHssCellLines.o \
     encode/encodeHapMapAlleleFreq.o encode/encodeIndels.o encode/encodePeak.o \
     encode/encodeRegionInfo.o encode/encodeRegionInfoCustom.o encode/encodeRna.o \
     encode/encodeStanfordPromoters.o encode/encodeStanfordPromotersAverage.o \
+    encode/pairedTagAlign.o encode/tagAlign.o  \
     ensFace.o ensInfo.o ensPhusionBlast.o ensXRefZfish.o \
     est3.o estOrientInfo.o \
     estPair.o exoFish.o expData.o expRecord.o exprBed.o \
     fbTables.o featureBits.o findKGAlias.o findKGProtAlias.o fishClones.o \