tdreszer: changes by file

branch to review (2009-09-15 to 2009-09-22) v216

• src/hg/encode/DAFs/UwChIPseq.daf
  • 1.1 lines changed: 50, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1
• src/hg/encode/DAFs/UwDnaseSeq.daf
  • 1.7 lines changed: 9, context: html, text, full: html, text
    view RawSignal
• src/hg/encode/DAFs/YDHChipSeq.daf
  • 1.1 lines changed: 39, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1
• src/hg/encode/DAFs/YDHChipSeqInput.daf
  • 1.1 lines changed: 33, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1
• src/hg/encode/DAFs/YDHChipSeqTreatment.daf
  • 1.1 lines changed: 39, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1
• src/hg/encode/DAFs/YDHRnaSeq.daf
  • 1.1 lines changed: 33, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1
• src/hg/encode/DAFs/YDHRnaSeqTreatment.daf
  • 1.1 lines changed: 35, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1
• src/hg/encode/encodeValidate/doEncodeValidate.pl
  • 1.194 lines changed: 3, context: html, text, full: html, text
    Fix a bug when no 'validationSettings' are provided.
• src/hg/encode/encodeValidate/config/cv.ra
  • 1.128 lines changed: 3, context: html, text, full: html, text
    Changed antibody TCF4 to TC7L2
• src/hg/js/hgTracks.js
  • 1.43 lines changed: 2, context: html, text, full: html, text
    One last change to make sure chromDrag off right end can still pick up selection
  • 1.42 lines changed: 44, context: html, text, full: html, text
    A bit more cleanup and make sure that after doing the chromDrag selection no more chromDrag code is called.
  • 1.41 lines changed: 159, context: html, text, full: html, text
    Fixed... scrolling, reverse, cyto-band coordinates and cleaned up.
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.528 lines changed: 26, context: html, text, full: html, text
    Changed antibody TCF4 to TCF7L2
  • 1.527 lines changed: 2, context: html, text, full: html, text
    Oops. YaleRnaSeq no longer has view, but left the subGroup
  • 1.525 lines changed: 2469, context: html, text, full: html, text
    Removed a bunch of RawSignals from Broad and Yale
• src/hg/utils/automation/Encode.pm
  • 1.45 lines changed: 4, context: html, text, full: html, text
    New order of the day. DAFs must have dafVersion 1.1