src/gfServer/gfServer.c 1.57
1.57 2009/10/09 19:36:03 kent
Trimming a few lines to make it follow same stepSize pattern as blat.c
Index: src/gfServer/gfServer.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/gfServer/gfServer.c,v
retrieving revision 1.56
retrieving revision 1.57
diff -b -B -U 4 -r1.56 -r1.57
--- src/gfServer/gfServer.c 8 Oct 2009 18:09:38 -0000 1.56
+++ src/gfServer/gfServer.c 9 Oct 2009 19:36:03 -0000 1.57
@@ -903,11 +903,9 @@
maxGap = 0;
repMatch = gfPepMaxTileUse;
}
tileSize = optionInt("tileSize", tileSize);
-stepSize = optionInt("stepSize", stepSize);
-if (stepSize == 0)
- stepSize = tileSize;
+stepSize = optionInt("stepSize", tileSize);
if (optionExists("repMatch"))
repMatch = optionInt("repMatch", 0);
else
repMatch = gfDefaultRepMatch(tileSize, stepSize, doTrans);