src/inc/genoFind.h 1.81

Index: src/inc/genoFind.h
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/inc/genoFind.h,v
retrieving revision 1.80
retrieving revision 1.81
diff -b -B -U 4 -r1.80 -r1.81
--- src/inc/genoFind.h	10 Feb 2009 21:58:56 -0000	1.80
+++ src/inc/genoFind.h	8 Oct 2009 18:09:38 -0000	1.81
@@ -348,8 +348,11 @@
 
 int gfConnect(char *hostName, char *portName);
 /* Set up our network connection to server. */
 
+int gfDefaultRepMatch(int tileSize, int stepSize, boolean protTiles);
+/* Figure out appropriate step repMatch value. */
+
 void gfMakeOoc(char *outName, char *files[], int fileCount, 
 	int tileSize, bits32 maxPat, enum gfType tType);
 /* Count occurences of tiles in seqList and make a .ooc file. */
 
@@ -373,8 +376,8 @@
  * function have already had clump->target->start subtracted from 
  * clump->tStart and clump->tEnd so that the coords are relative to that 
  * target sequence (not the collection of all target sequences). */
 
-#define gfVersion "34x4"	/* Current BLAT version number */
+#define gfVersion "34x5"	/* Current BLAT version number */
 
 #endif /* GENOFIND_H */