src/hg/lib/alignInfo.sql 1.1

Index: src/hg/lib/alignInfo.sql
===================================================================
RCS file: src/hg/lib/alignInfo.sql
diff -N src/hg/lib/alignInfo.sql
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/lib/alignInfo.sql	6 Oct 2009 17:11:02 -0000	1.1
@@ -0,0 +1,21 @@
+# alignInfo.sql was originally generated by the autoSql program, which also 
+# generated alignInfo.c and alignInfo.h.  This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly 
+# automatic way.
+
+#Aligned Features Description
+CREATE TABLE alignInfo (
+    chrom varchar(255) not null,	# chromosome
+    chromStart int unsigned not null,	# Start position in chromosome
+    chromEnd int unsigned not null,	# End position in chromosome
+    name varchar(255) not null,	# hit name
+    score int unsigned not null,	# Score from 900-1000.  1000 is best
+    strand char(1) not null,	# Value should be + or -
+    hasmatch int unsigned not null,	# If it has match in aligned species
+    orgn varchar(255) not null,	# aligned organism
+    alignChrom varchar(255) not null,	# chromosome for aligned species
+    alignChromStart int unsigned not null,	# Start position in chromosome for aligned species
+    alignChromEnd int unsigned not null,	# End position in chromosome for aligned species
+              #Indices
+    PRIMARY KEY(chrom, chromStart, chromEnd, name)
+);