Index: src/hg/hgc/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/makefile,v
retrieving revision 1.63
retrieving revision 1.64
diff -b -B -U 1000000 -r1.63 -r1.64
--- src/hg/hgc/makefile	2 Aug 2009 18:57:08 -0000	1.63
+++ src/hg/hgc/makefile	8 Oct 2009 06:25:38 -0000	1.64
@@ -1,39 +1,36 @@
 include ../../inc/common.mk
 
 L += -lm ${MYSQLLIBS} 
 MYLIBDIR = ../../lib/${MACHTYPE}
 MYLIBS =  ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a
-ifeq (${USE_BAM},1)
-    MYLIBS += ${SAMLIB}
-endif
 
 A = hgc
 
 O = $A.o bamClick.o bigBedClick.o cgapSageClick.o encodeClick.o expClick.o mafClick.o \
 	hgdpClick.o regMotif.o wiggleClick.o retroClick.o \
 	lowelab.o rnaFoldClick.o transMapClick.o txCdsInfo.o \
 	ccdsClick.o mgcClick.o dbRIP.o wikiTrack.o virusClick.o
 
 include ../../inc/cgi_build_rules.mk
 
 mgsc: compile
 	mv $A ${CGI_BIN}-mgsc/$A
 
 compile: $O 
 	${CC} ${CFLAGS} $O ${F64} ${MYLIBS} ${L}
 	mv ${AOUT} $A${EXE}
 
 my::
 	rm -rf ${CGI_BIN}-${USER}/hgcData ${CGI_BIN}-${USER}/lsSnpPdbChimera.py
 	rsync -ar --exclude=CVS/ --exclude=.svn/ --delete hgcData ../lib/lsSnpPdbChimera.py ${CGI_BIN}-${USER}/
 	chmod -R a+rX ${CGI_BIN}-${USER}/hgcData ${CGI_BIN}-${USER}/lsSnpPdbChimera.py
 
 alpha::
 	rm -fr ${CGI_BIN}/hgcData ${CGI_BIN}/lsSnpPdbChimera.py
 	rsync -ar --exclude=CVS/ --exclude=.svn/ --delete hgcData ../lib/lsSnpPdbChimera.py ${CGI_BIN}/
 	chmod -R a+rX,g+w ${CGI_BIN}/hgcData ${CGI_BIN}/lsSnpPdbChimera.py
 
 beta::
 	rm -fr ${CGI_BIN}-beta/hgcData ${CGI_BIN}-beta/lsSnpPdbChimera.py
 	rsync -ar --exclude=CVS/ --exclude=.svn/ --delete hgcData ../lib/lsSnpPdbChimera.py ${CGI_BIN}-beta/
 	chmod -R a+rX,g+w ${CGI_BIN}-beta/hgcData ${CGI_BIN}-beta/lsSnpPdbChimera.py

