kent: changes by file

review to branch (2009-10-06 to 2009-10-13) v217

• src/blat/blat.c
  • 1.115 lines changed: 1, context: html, text, full: html, text
    Making sure stepSize is initialized
  • 1.114 lines changed: 45, context: html, text, full: html, text
    Moving repMatch calculations from blat to library so can be shared with gfServer.
• src/blat/version.doc
  • 1.74 lines changed: 2, context: html, text, full: html, text
    Moving repMatch calculations from blat to library so can be shared with gfServer.
• src/gfServer/gfServer.c
  • 1.57 lines changed: 3, context: html, text, full: html, text
    Trimming a few lines to make it follow same stepSize pattern as blat.c
  • 1.56 lines changed: 5, context: html, text, full: html, text
    Moving repMatch calculations from blat to library so can be shared with gfServer.
• src/hg/makeDb/schema/all.joiner
  • 1.738 lines changed: 1, context: html, text, full: html, text
    Adding hg19 to set of most recent 'knownGene' format databases.
• src/inc/genoFind.h
  • 1.81 lines changed: 4, context: html, text, full: html, text
    Moving repMatch calculations from blat to library so can be shared with gfServer.
• src/jkOwnLib/genoFind.c
  • 1.26 lines changed: 48, context: html, text, full: html, text
    Moving repMatch calculations from blat to library so can be shared with gfServer.