jsanborn: changes by file

branch to review (2009-09-29 to 2009-10-06) v217

• src/hg/tcga/bamBam/bamBam.c
  • 1.8 lines changed: 8, context: html, text, full: html, text
    finally fixed terrible bug, implemented seeking
  • 1.7 lines changed: 383, context: html, text, full: html, text
    updated
  • 1.6 lines changed: 472, context: html, text, full: html, text
    updated
• src/hg/tcga/bamBam/bam_dual_pileup.c
  • 1.6 lines changed: 190, context: html, text, full: html, text
    finally fixed terrible bug, implemented seeking
  • 1.5 lines changed: 1, context: html, text, full: html, text
    fixed a terrible, terrible bug
• src/hg/tcga/bamBam/bam_dual_pileup.h
  • 1.4 lines changed: 2, context: html, text, full: html, text
    finally fixed terrible bug, implemented seeking
• src/hg/tcga/bamFindPairs/bamFindPairs.c
  • 1.1 lines changed: 331, context: html, text, full: html, text
    init commit
• src/hg/tcga/bamFindPairs/makefile
  • 1.1 lines changed: 23, context: html, text, full: html, text
    init commit