kate: changes by commit

branch to review (2009-09-29 to 2009-10-06) v217

• Weng lab ENCODE data agreement
  • src/hg/encode/DAFs/UMassTfbsAll.daf 1.1 - lines changed: 22, context: html, text, full: html, text
  • src/hg/encode/DAFs/UMassTfbsAll.ddf 1.1 - lines changed: 2, context: html, text, full: html, text
  • src/hg/encode/DAFs/UMassTfbsValid.daf 1.1 - lines changed: 20, context: html, text, full: html, text
  • src/hg/encode/DAFs/UMassTfbsValid.ddf 1.1 - lines changed: 2, context: html, text, full: html, text
• Add custom bed schema for Weng lab
  • src/hg/utils/automation/Encode.pm 1.47 - lines changed: 1, context: html, text, full: html, text
• Add DAF support for listing sql schema for custom bed file
  • src/hg/encode/encodeValidate/config/fields.ra 1.20 - lines changed: 5, context: html, text, full: html, text
• Add support for 'sql' field in DAF. Allows specifying the schema for a non-standard table. The .sql file needs to be copied to /cluster/bin//sqlCreate
  • src/hg/encode/encodeLoad/doEncodeLoad.pl 1.71 - lines changed: 4, context: html, text, full: html, text
  • src/hg/encode/encodeValidate/doEncodeValidate.pl 1.196 - lines changed: 4, context: html, text, full: html, text
• Add SQL schema
  • src/hg/encode/DAFs/UMassTfbsValid.daf 1.2 - lines changed: 1, context: html, text, full: html, text