pchan: changes by file

branch to review (2009-09-29 to 2009-10-06) v217

• src/hg/archaeStuff/data/Genome-info-mods
  • 1.85 lines changed: 1, context: html, text, full: html, text
    fix Name_chg again
  • 1.84 lines changed: 1, context: html, text, full: html, text
    add Name_chg to desuKamc1
  • 1.83 lines changed: 35, context: html, text, full: html, text
    change methFerv0 to methFerv1; add public multiz for halos to exclude natrMaga0; add info for haloUtah1
  • 1.82 lines changed: 2, context: html, text, full: html, text
    remove pyroOgun03 from public multiz of therPend1
• src/hg/archaeStuff/data/private-genomes.tab
  • 1.1 lines changed: 32, context: html, text, full: html, text
    list of private genomes in alt browser - to be used by make-browser
• src/hg/archaeStuff/scripts/archaeBrowser/OrganismDb.pm
  • 1.43 lines changed: 5, context: html, text, full: html, text
    fix description page with slash in abstract
  • 1.42 lines changed: 8, context: html, text, full: html, text
    sync everything from archtest to public
• src/hg/archaeStuff/scripts/archaeBrowser/ProteinStructure.pm
  • 1.3 lines changed: 1, context: html, text, full: html, text
    fixed Pfam load by Todd
• src/hg/makeDb/trackDb/lowelab/igenics.html
  • 1.2 lines changed: 1, context: html, text, full: html, text
    change description
• src/hg/makeDb/trackDb/lowelab/igenicsMicroarray.html
  • 1.1 lines changed: 4, context: html, text, full: html, text
    rename track and file
• src/hg/makeDb/trackDb/lowelab/privateTracks.ra
  • 1.20 lines changed: 14, context: html, text, full: html, text
    add private multiz, RNA and sequencing tracks
• src/hg/makeDb/trackDb/lowelab/caldMaqu1/trackDb.ra
  • 1.16 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/halMar1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/halMar1/trackDb.ra
  • 1.17 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.16 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/haloHalo1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/haloHalo1/trackDb.ra
  • 1.21 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.20 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/haloSali1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/haloSali1/trackDb.ra
  • 1.11 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.10 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/haloUtah1/multizHalophiles.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/haloUtah1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/haloUtah1/trackDb.ra
  • 1.3 lines changed: 17, context: html, text, full: html, text
    Update multiz track
  • 1.2 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/haloVolc1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/haloVolc1/trackDb.ra
  • 1.8 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.7 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/haloWals1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/haloWals1/trackDb.ra
  • 1.13 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.12 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/methInfe0/multizMethanococcus.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/methInfe0/trackDb.ra
  • 1.6 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/methJann1/trackDb.ra
  • 1.15 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/methVulc0/trackDb.ra
  • 1.4 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/natrPhar1/multizHalophilesPriv.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/natrPhar1/trackDb.ra
  • 1.13 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.12 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/pyroArse1/trackDb.ra
  • 1.27 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/pyroCali1/trackDb.ra
  • 1.29 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/pyroIsla1/trackDb.ra
  • 1.30 lines changed: 1, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/therNeut1/multizPbacCmaTpe.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/therNeut1/trackDb.ra
  • 1.10 lines changed: 17, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/therPend1/multizPbacCmaTpe.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/therPend1/trackDb.ra
  • 1.12 lines changed: 4, context: html, text, full: html, text
    Update multiz track
• src/hg/makeDb/trackDb/lowelab/vulcDist0/multizPbacVdiCmaTpe.html
  • 1.1 lines changed: 161, context: html, text, full: html, text
    Details page for multiz track
• src/hg/makeDb/trackDb/lowelab/vulcDist0/trackDb.ra
  • 1.7 lines changed: 1, context: html, text, full: html, text
    Update multiz track
  • 1.6 lines changed: 17, context: html, text, full: html, text
    Update multiz track
  • 1.5 lines changed: 17, context: html, text, full: html, text
    Update multiz track