src/hg/makeDb/doc/hg19.txt 1.46
1.46 2009/10/15 20:14:11 kent
Getting rid of _1 from hprd ID's.
Index: src/hg/makeDb/doc/hg19.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/hg19.txt,v
retrieving revision 1.45
retrieving revision 1.46
diff -b -B -U 4 -r1.45 -r1.46
--- src/hg/makeDb/doc/hg19.txt 14 Oct 2009 15:29:11 -0000 1.45
+++ src/hg/makeDb/doc/hg19.txt 15 Oct 2009 20:14:11 -0000 1.46
@@ -6594,9 +6594,9 @@
hgsql hg19 -N -e 'select kgId,hprdId from hprdToCdna, kgXref where cdnaId=kgId' >j.kg1
hgsql hg19 -N -e 'select kgId,hprdId from hprdToUniProt, kgXref where uniProtId=spId' >j.kg2
- cat j.kg1 j.kg2 |sort -u >knownToHprd.tab
+ cat j.kg1 j.kg2 | sed 's/_.//' | sort -u >knownToHprd.tab
wc knownToHprd.tab
hgsql hg19 <~/src/hg/lib/knownToHprd.sql