src/hg/makeDb/doc/hg19.txt 1.47
1.47 2009/10/15 22:36:03 galt
updating visiGene for hg19
Index: src/hg/makeDb/doc/hg19.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/hg19.txt,v
retrieving revision 1.46
retrieving revision 1.47
diff -b -B -U 4 -r1.46 -r1.47
--- src/hg/makeDb/doc/hg19.txt 15 Oct 2009 20:14:11 -0000 1.46
+++ src/hg/makeDb/doc/hg19.txt 15 Oct 2009 22:36:03 -0000 1.47
@@ -6435,8 +6435,16 @@
ln -s /cluster/data/hg19/bed/nibbPics/nibbImageProbes.fa /gbdb/hg19/nibbImageProbes.fa
hgLoadSeq hg19 /gbdb/hg19/nibbImageProbes.fa
hgLoadPsl hg19 nibbImageProbes.psl
+##########################################################################
+# Initial vgProbeTrack run for hg19 (galt 2009-10-15)
+# see visiGene.txt make doc
+# uses nibbImageProbes and vgProbeTrack utility
+# creates vgAllProbes and knownToVisiGene
+# 25931
+# updates visiGene.vgPrbAliAll.
+# creates and runs hgLoadSeq on /gbdb/hg19/visiGene/*.fa
##########################################################################
# make new grp table to match hg18 (DONE 2009-10-01 kuhn)
# to split regulation from expression