src/utils/qa/knownGene.csh 1.15
1.15 2009/10/14 17:20:03 kuhn
added kgTableAll
Index: src/utils/qa/knownGene.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/knownGene.csh,v
retrieving revision 1.14
retrieving revision 1.15
diff -b -B -U 4 -r1.14 -r1.15
--- src/utils/qa/knownGene.csh 14 Oct 2009 17:17:13 -0000 1.14
+++ src/utils/qa/knownGene.csh 14 Oct 2009 17:20:03 -0000 1.15
@@ -471,8 +471,9 @@
echo
echo "-------------------------------------------------"
echo "check all tables for null + zero entries:"
+cat kgTables gsTables pbTables | sort -u > kgTablesAll
foreach table (`cat kgTablesAll`)
hgsql -N -e "DESC $table" $db | gawk '{print $1}' > ${table}Cols
echo $table
echo "============="