src/hg/lib/arCOGs.sql 1.1

1.1 2009/10/14 20:27:42 holmes
adding arcog table
Index: src/hg/lib/arCOGs.sql
===================================================================
RCS file: src/hg/lib/arCOGs.sql
diff -N src/hg/lib/arCOGs.sql
--- /dev/null	1 Jan 1970 00:00:00 -0000
+++ src/hg/lib/arCOGs.sql	14 Oct 2009 20:27:42 -0000	1.1
@@ -0,0 +1,17 @@
+# arCOGs.sql was originally generated by the autoSql program, which also 
+# generated arCOGs.c and arCOGs.h.  This creates the database representation of
+# an object which can be loaded and saved from RAM in a fairly 
+# automatic way.
+
+#arCOG Information
+CREATE TABLE arCOGs (
+    chrom varchar(255) not null,	# chromosome
+    chromStart int unsigned not null,	# Start position in chromosome
+    chromEnd int unsigned not null,	# End position in chromosome
+    name varchar(255) not null,	# hit name
+    score int unsigned not null,	# Score from 900-1000.  1000 is best
+    strand char(1) not null,	# Value should be + or -
+    gene varchar(255) not null,	# standard name
+              #Indices
+    PRIMARY KEY(chrom,chromStart,chromEnd,name)
+);