markd: changes by file

branch to review (2009-10-13 to 2009-10-20) v218

• src/hg/lib/jksql.c
  • 1.138 lines changed: 1, context: html, text, full: html, text
    deleted forgotten debug
• src/hg/makeDb/genbank/src/gbSanity/chkAlignTbls.c
  • 1.14 lines changed: 2, context: html, text, full: html, text
    backed out previous change, as it was incorrect. Instead improve a more informative diagnostic message
• src/hg/makeDb/genbank/src/gbSanity/chkGbIndex.c
  • 1.7 lines changed: 3, context: html, text, full: html, text
    backed out previous change, as it was incorrect. Instead improve a more informative diagnostic message
  • 1.6 lines changed: 3, context: html, text, full: html, text
    don't skip validate non-coding RNAs
• src/hg/makeDb/hgLoadSeq/hgLoadSeq.c
  • 1.16 lines changed: 16, context: html, text, full: html, text
    don't generate warnings on invalid dates; error not if warns occur, also added -drop option
• src/utils/jkUniq/jkUniq.c
  • 1.4 lines changed: 4, context: html, text, full: html, text
    added warning that it overwrite input; fixed bug in count