src/hg/tcga/bamBam/makefile 1.3

Index: src/hg/tcga/bamBam/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/tcga/bamBam/makefile,v
retrieving revision 1.2
retrieving revision 1.3
diff -b -B -U 1000000 -r1.2 -r1.3
--- src/hg/tcga/bamBam/makefile	6 Nov 2009 07:08:06 -0000	1.2
+++ src/hg/tcga/bamBam/makefile	6 Nov 2009 20:27:30 -0000	1.3
@@ -1,19 +1,27 @@
 USE_BAM = 1
 include ../../../inc/common.mk
 
 L += $(MYSQLLIBS) -lm
 MYLIBDIR = ../../../lib/${MACHTYPE}
 MYLIBS =  $(MYLIBDIR)/jkhgap.a ${MYLIBDIR}/jkweb.a
 
-A = bamBam
-O = bamBam.o bam_dual_pileup.o
+A1 = bamBam
+O1 = bamBam.o bam_dual_pileup.o
 
-bamBam: ${O} ${MYLIBS}
-	${CC} ${COPT} -o ${DESTDIR}${BINDIR}/${A}${EXE} $O ${MYLIBS} $L
-	${STRIP} ${DESTDIR}${BINDIR}/${A}${EXE}
+A2 = bamBamCNV
+O2 = bamBamCNV.o bam_dual_pileup.o
 
-compile:: ${O}
-	${CC} ${COPT} -o ${A}${EXE} ${O} ${MYLIBS} $L
+bamBam: ${O1} ${MYLIBS}
+	${CC} ${COPT} -o ${DESTDIR}${BINDIR}/${A1}${EXE} ${O1} ${MYLIBS} $L
+	${STRIP} ${DESTDIR}${BINDIR}/${A1}${EXE}
+
+bamBamCNV: ${O2} ${MYLIBS}
+	${CC} ${COPT} -o ${DESTDIR}${BINDIR}/${A2}${EXE} ${O2} ${MYLIBS} $L
+	${STRIP} ${DESTDIR}${BINDIR}/${A2}${EXE}
+
+compile:: ${O1}
+	${CC} ${COPT} -o ${A1}${EXE} ${O1} ${MYLIBS} $L
 
 clean::
-	rm -f ${A} ${O}
+	rm -f ${A1} ${O1}
+	rm -f ${A2} ${O2}