hiram: changes by file

review to branch (2009-11-03 to 2009-11-10) v219

• src/hg/hgTrackUi/hgTrackUi.c
  • 1.507 lines changed: 4, context: html, text, full: html, text
    Fixup chainNet composite Ui
• src/hg/makeDb/trackDb/makefile
  • 1.277 lines changed: 1, context: html, text, full: html, text
    Adding susScr1 to the build
• src/hg/makeDb/trackDb/human/hg19/cons46way.html
  • 1.3 lines changed: 3, context: html, text, full: html, text
    Fixup some dates on assemblies
  • 1.2 lines changed: 8, context: html, text, full: html, text
    Add reference to new paper on phyloP
  • 1.1 lines changed: 578, context: html, text, full: html, text
    Copied from the hg18 44way and updated for 46 way specifics
• src/hg/makeDb/trackDb/pig/susScr1/description.html
  • 1.1 lines changed: 129, context: html, text, full: html, text
    Initial contents from makeGenomeDb.pl
• src/hg/makeDb/trackDb/pig/susScr1/gap.html
  • 1.1 lines changed: 63, context: html, text, full: html, text
    Initial contents from makeGenomeDb.pl
• src/hg/makeDb/trackDb/pig/susScr1/gold.html
  • 1.1 lines changed: 22, context: html, text, full: html, text
    Initial contents from makeGenomeDb.pl
• src/hg/makeDb/trackDb/pig/susScr1/trackDb.ra
  • 1.1 lines changed: 8, context: html, text, full: html, text
    Initial contents from makeGenomeDb.pl
• src/utils/mkUsageIndex.sh
  • 1.4 lines changed: 11, context: html, text, full: html, text
    Updated for todays source tree particularies