src/hg/encode/DAFs/HAIBChIPseq.daf 1.1
1.1 2009/10/29 19:26:15 tdreszer
New DAF for Rami
Index: src/hg/encode/DAFs/HAIBChIPseq.daf
===================================================================
RCS file: src/hg/encode/DAFs/HAIBChIPseq.daf
diff -N src/hg/encode/DAFs/HAIBChIPseq.daf
--- /dev/null 1 Jan 1970 00:00:00 -0000
+++ src/hg/encode/DAFs/HAIBChIPseq.daf 29 Oct 2009 19:26:15 -0000 1.1
@@ -0,0 +1,38 @@
+# Data Agreement File for Myers/HudsonAlpha ChIP-seq experiments $Revision$
+
+# Lab and general info
+grant Myers
+lab HudsonAlpha
+dataType ChipSeq
+variables cell, antibody
+assembly hg18
+medianFragmentLength 225
+fragmentLengthRange 150-300
+dafVersion 1.1
+validationSettings validateFiles.tagAlign:mmCheckOneInN=100,mismatches=2,matchFirst=32,nMatch
+
+# Track/view definition
+view Peaks
+longLabelPrefix HudsonAlpha ChIP-Seq Peaks
+type broadPeak
+hasReplicates yes
+required no
+
+view Alignments
+longLabelPrefix HudsonAlpha ChIP-Seq Alignments
+type tagAlign
+hasReplicates yes
+required no
+
+view RawSignal
+longLabelPrefix HudsonAlpha ChIP-Seq Raw Signal
+type wig
+hasReplicates yes
+required no
+
+view RawData
+type fastq
+hasReplicates yes
+required no
+
+