src/hg/pslStats/tests/makefile 1.6

Index: src/hg/pslStats/tests/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/pslStats/tests/makefile,v
retrieving revision 1.5
retrieving revision 1.6
diff -b -B -U 1000000 -r1.5 -r1.6
--- src/hg/pslStats/tests/makefile	2 Jun 2007 21:57:18 -0000	1.5
+++ src/hg/pslStats/tests/makefile	30 Oct 2009 21:08:19 -0000	1.6
@@ -1,50 +1,52 @@
 include ../../../inc/common.mk
 
+pslStats = ${BINDIR}/pslStats
+
 test:	untransAlignTest untransQueryTest untransOverallTest \
 	untransAlignUnalnTest untransQueryUnalnTest untransOverallUnalnTest \
 	cdna2cdnaAlignTest cdna2cdnaQueryTest cdna2cdnaOverallTest
 
 # basic set of tests with an untranslated psl
 untransAlignTest: mkdirs
-	pslStats input/basic.psl output/$@.stats
+	${pslStats} input/basic.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 untransQueryTest: mkdirs
-	pslStats -queryStats input/basic.psl output/$@.stats
+	${pslStats} -queryStats input/basic.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 untransOverallTest: mkdirs
-	pslStats -overallStats input/basic.psl output/$@.stats
+	${pslStats} -overallStats input/basic.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 # tests with list which has unaligned sequences
 untransAlignUnalnTest: mkdirs
-	pslStats -queries=input/basic.queries input/basic.psl output/$@.stats
+	${pslStats} -queries=input/basic.queries input/basic.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 untransQueryUnalnTest: mkdirs
-	pslStats -queryStats -queries=input/basic.queries input/basic.psl output/$@.stats
+	${pslStats} -queryStats -queries=input/basic.queries input/basic.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 untransOverallUnalnTest: mkdirs
-	pslStats -overallStats -queries=input/basic.queries input/basic.psl output/$@.stats
+	${pslStats} -overallStats -queries=input/basic.queries input/basic.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 # cDNA to cDNA alignments, will have tCover that is interesting
 cdna2cdnaAlignTest: mkdirs
-	pslStats -queries=input/cdna2cdna.queries input/cdna2cdna.psl output/$@.stats
+	${pslStats} -queries=input/cdna2cdna.queries input/cdna2cdna.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 cdna2cdnaQueryTest: mkdirs
-	pslStats -queryStats -queries=input/cdna2cdna.queries input/cdna2cdna.psl output/$@.stats
+	${pslStats} -queryStats -queries=input/cdna2cdna.queries input/cdna2cdna.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 cdna2cdnaOverallTest: mkdirs
-	pslStats -overallStats -queries=input/cdna2cdna.queries input/cdna2cdna.psl output/$@.stats
+	${pslStats} -overallStats -queries=input/cdna2cdna.queries input/cdna2cdna.psl output/$@.stats
 	diff -u expected/$@.stats output/$@.stats
 
 clean::
 	rm -rf output
 
 mkdirs:
 	@${MKDIR} output