src/hg/makeDb/doc/bosTauMd3.txt 1.2

Index: src/hg/makeDb/doc/bosTauMd3.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/bosTauMd3.txt,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 4 -r1.1 -r1.2
--- src/hg/makeDb/doc/bosTauMd3.txt	21 Nov 2009 01:25:40 -0000	1.1
+++ src/hg/makeDb/doc/bosTauMd3.txt	25 Nov 2009 00:29:11 -0000	1.2
@@ -139,4 +139,16 @@
 
 # ask admin to sync this directory: /hive/data/staging/data/bosTauMd3/
 #	to the kluster nodes /scratch/data/bosTauMd3/
 
+#############################################################################
+# LIFTOVER TO bosTau4 (DONE - 2009-11-23 - Galt )
+    mkdir /hive/data/genomes/bosTauMd3/bed/blat.bosTau4.2009-11-23
+    cd /hive/data/genomes/bosTauMd3/bed/blat.bosTau4.2009-11-23
+    time nice +19 doSameSpeciesLiftOver.pl -verbose=2 \
+	-bigClusterHub=pk -dbHost=hgwdev -workhorse=hgwdev \
+	 bosTauMd3 bosTau4 >& do.log
+    # it actually ran out of space on /scratch/tmp
+    # and I moved the temp dir somewhere else and
+    # finished the net step.  I did not do the load or cleanup steps.
+
+