Index: src/hg/pslCDnaGenomeMatch/expected/testBQ.psl
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/pslCDnaGenomeMatch/expected/testBQ.psl,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 4 -r1.1 -r1.2
--- src/hg/pslCDnaGenomeMatch/expected/testBQ.psl	13 Feb 2007 20:14:41 -0000	1.1
+++ src/hg/pslCDnaGenomeMatch/expected/testBQ.psl	1 Dec 2009 06:45:02 -0000	1.2
@@ -1,8 +1,8 @@
 482	1	0	0	0	0	2	265	+	BQ214320	890	0	483	chr16	88827254	22453942	22454690	3	125,126,232,	0,125,251,	22453942,22454193,22454458,
-529	3	0	0	1	131	2	338	-+	BQ214320	890	0	663	chr16	88827254	21321235	21322105	3	14,13,505,	227,241,385,	21321235,21321377,21321600,
-530	2	0	0	1	131	2	1592	-+	BQ214320	890	0	663	chr16	88827254	30141980	30144104	3	14,13,505,	227,241,385,	30141980,30142122,30143599,
-632	4	0	0	9	122	7	432752	-+	BQ214320	890	0	758	chr16	88827254	21321151	21754539	12	8,6,8,11,5,8,12,16,16,27,14,505,	132,146,154,163,181,187,196,209,225,241,286,385,	21321151,21321162,21321169,21321177,21321193,21321198,21321206,21321218,21753580,21753682,21753769,21754034,
-645	6	71	0	11	36	6	106	-+	BQ214320	890	0	758	chr16	88827254	30141896	30142724	13	8,6,8,11,5,8,12,16,15,27,18,25,563,	132,146,154,163,181,187,196,209,225,241,281,300,327,	30141896,30141907,30141914,30141922,30141938,30141943,30141951,30141963,30142065,30142080,30142117,30142135,30142161,
-646	6	74	0	12	32	5	406	-+	BQ214320	890	0	758	chr16	88827254	29402643	29403775	14	8,6,8,11,10,6,14,15,15,27,18,25,99,464,	132,146,154,163,176,187,194,209,225,241,281,300,327,426,	29402643,29402654,29402661,29402669,29402680,29402690,29402696,29402710,29402725,29402740,29402777,29402795,29402821,29403311,
+529	3	0	0	1	131	2	338	-	BQ214320	890	0	663	chr16	88827254	21321235	21322105	3	14,13,505,	227,241,385,	21321235,21321377,21321600,
+530	2	0	0	1	131	2	1592	-	BQ214320	890	0	663	chr16	88827254	30141980	30144104	3	14,13,505,	227,241,385,	30141980,30142122,30143599,
+632	4	0	0	9	122	7	432752	-	BQ214320	890	0	758	chr16	88827254	21321151	21754539	12	8,6,8,11,5,8,12,16,16,27,14,505,	132,146,154,163,181,187,196,209,225,241,286,385,	21321151,21321162,21321169,21321177,21321193,21321198,21321206,21321218,21753580,21753682,21753769,21754034,
+645	6	71	0	11	36	6	106	-	BQ214320	890	0	758	chr16	88827254	30141896	30142724	13	8,6,8,11,5,8,12,16,15,27,18,25,563,	132,146,154,163,181,187,196,209,225,241,281,300,327,	30141896,30141907,30141914,30141922,30141938,30141943,30141951,30141963,30142065,30142080,30142117,30142135,30142161,
+646	6	74	0	12	32	5	406	-	BQ214320	890	0	758	chr16	88827254	29402643	29403775	14	8,6,8,11,10,6,14,15,15,27,18,25,99,464,	132,146,154,163,176,187,194,209,225,241,281,300,327,426,	29402643,29402654,29402661,29402669,29402680,29402690,29402696,29402710,29402725,29402740,29402777,29402795,29402821,29403311,
 646	6	74	0	12	32	5	532	+	BQ214320	890	0	758	chr16	88827254	22453816	22455074	14	98,465,25,18,26,14,17,14,6,10,11,8,6,8,	0,98,565,591,622,649,664,682,697,704,716,728,738,750,	22453816,22454431,22454897,22454922,22454950,22454976,22454990,22455007,22455021,22455027,22455037,22455048,22455057,22455066,
-648	7	71	0	12	32	5	102610	-+	BQ214320	890	0	758	chr16	88827254	29300313	29403649	14	8,6,8,11,10,6,14,15,15,27,18,25,243,320,	132,146,154,163,176,187,194,209,225,241,281,300,327,570,	29300313,29300324,29300331,29300339,29300350,29300360,29300366,29300380,29300395,29300410,29300447,29300465,29300491,29403329,
+648	7	71	0	12	32	5	102610	-	BQ214320	890	0	758	chr16	88827254	29300313	29403649	14	8,6,8,11,10,6,14,15,15,27,18,25,243,320,	132,146,154,163,176,187,194,209,225,241,281,300,327,570,	29300313,29300324,29300331,29300339,29300350,29300360,29300366,29300380,29300395,29300410,29300447,29300465,29300491,29403329,

