src/parasol/paraNodeStart/paraNodeStart.c 1.15

1.15 2009/11/21 01:07:58 markd
added option to allow setting arbitrary environment variable for jobs
Index: src/parasol/paraNodeStart/paraNodeStart.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/parasol/paraNodeStart/paraNodeStart.c,v
retrieving revision 1.14
retrieving revision 1.15
diff -b -B -U 4 -r1.14 -r1.15
--- src/parasol/paraNodeStart/paraNodeStart.c	15 May 2008 00:42:27 -0000	1.14
+++ src/parasol/paraNodeStart/paraNodeStart.c	21 Nov 2009 01:07:58 -0000	1.15
@@ -12,8 +12,9 @@
     {"hub", OPTION_STRING},
     {"umask", OPTION_INT},
     {"userPath", OPTION_STRING},
     {"sysPath", OPTION_STRING},
+    {"env", OPTION_STRING|OPTION_MULTI},
     {"randomDelay", OPTION_INT},
     {"exe", OPTION_STRING},
     {"rsh", OPTION_STRING},
     {NULL, 0}
@@ -40,8 +41,9 @@
  "    -umask=000  Set umask to run under - default 002.\n"
  "    -randomDelay=N  Set random start delay in milliseconds - default 5000.\n"
  "    -userPath=bin:bin/i386  User dirs to add to path.\n"
  "    -sysPath=/sbin:/local/bin  System dirs to add to path.\n"
+ "    -env=name=value - add environment variable to jobs.  Maybe repeated.\n"
  "    -hub=machineHostingParaHub  Nodes will ignore messages from elsewhere.\n"
  "    -rsh=/path/to/rsh/like/command.\n"
  , version
  );
@@ -54,8 +56,17 @@
 if (val != NULL)
    dyStringPrintf(dy, " %s=%s", option, val);
 }
 
+void carryMultiOption(char *option, struct dyString *dy)
+/* Carry multi-valued option from our command line to paraNode's. Do
+ * naive quoting */
+{
+struct slName *val;
+for (val = optionMultiVal(option, NULL); val != NULL; val = val->next)
+    dyStringPrintf(dy, " %s='%s'", option, val->name);
+}
+
 void paraNodeStart(char *machineList)
 /* Start node servers on all machines in list. */
 {
 char *exe = optionVal("exe", "paraNode");
@@ -78,8 +89,9 @@
     carryOption("hub", dy);
     carryOption("umask", dy);
     carryOption("sysPath", dy);
     carryOption("userPath", dy);
+    carryMultiOption("env", dy);
     carryOption("randomDelay", dy);
     printf("%s\n", dy->string);
     system(dy->string);
     }