src/utils/qa/weeklybld/buildHgCentralSql.csh 1.20
1.20 2009/11/17 20:59:32 galt
using flag to produce separate insert statements in dump
Index: src/utils/qa/weeklybld/buildHgCentralSql.csh
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/qa/weeklybld/buildHgCentralSql.csh,v
retrieving revision 1.19
retrieving revision 1.20
diff -b -B -U 1000000 -r1.19 -r1.20
--- src/utils/qa/weeklybld/buildHgCentralSql.csh 14 Nov 2009 06:45:31 -0000 1.19
+++ src/utils/qa/weeklybld/buildHgCentralSql.csh 17 Nov 2009 20:59:32 -0000 1.20
@@ -1,79 +1,78 @@
#!/bin/tcsh
cd $WEEKLYBLD
if ( "$HOST" != "hgwdev" ) then
echo "error: you must run this script on hgwdev!"
exit 1
endif
hgsqldump --all -d -c -h genome-centdb hgcentral \
sessionDb userDb | sed -e "s/genome-centdb/localhost/" > \
/tmp/hgcentraltemp.sql
-hgsqldump --all -c -h genome-centdb hgcentral \
+# --skip-extended-insert
+# to make it dump rows as separate insert statements
+hgsqldump --all --skip-extended-insert -c -h genome-centdb hgcentral \
defaultDb blatServers dbDb dbDbArch gdbPdb liftOverChain clade genomeClade targetDb | \
sed -e "s/genome-centdb/localhost/" >> /tmp/hgcentraltemp.sql
-# TODO --skip-extended-insert
-# is supposed to make it dump rows as separate insert statements
-#
# get rid of some mysql5 trash in the output we don't want.
# also need to break data values at rows so the diff and cvs
# which are line-oriented work better.
grep -v "Dump completed on" /tmp/hgcentraltemp.sql | \
-sed -e "s/AUTO_INCREMENT=[0-9]* //" \
- | sed -e 's/),(/),\n(/g' > /tmp/hgcentral.sql
+sed -e "s/AUTO_INCREMENT=[0-9]* //" > \
+/tmp/hgcentral.sql
echo
echo "*** Diffing old new ***"
diff /usr/local/apache/htdocs/admin/hgcentral.sql /tmp/hgcentral.sql
if ( ! $status ) then
echo
echo "No differences."
echo
exit 0
endif
if ( "$1" != "real" ) then
echo
echo "Not real. To make real changes, put real as cmdline parm."
echo
exit 0
endif
rm /usr/local/apache/htdocs/admin/hgcentral.sql
cp -p /tmp/hgcentral.sql /usr/local/apache/htdocs/admin/hgcentral.sql
rm hiding/hgcent/hgcentral.sql
cp -p /tmp/hgcentral.sql hiding/hgcent/hgcentral.sql
cd hiding/hgcent
set temp = '"'"v${BRANCHNN}"'"'
cvs -d hgwdev:/projects/compbio/cvsroot commit -m $temp hgcentral.sql
if ( $status ) then
echo "error during cvs commit of hgcentral.sql."
exit 1
endif
# push to hgdownload
ssh -n qateam@hgdownload "rm /mirrordata/apache/htdocs/admin/hgcentral.sql"
scp -p /usr/local/apache/htdocs/admin/hgcentral.sql qateam@hgdownload:/mirrordata/apache/htdocs/admin/
# OLD WAY NOT NEEDED
#echo
#echo "Push request:"
#echo "Please push from dev --> hgdownload "
#echo " /usr/local/apache/htdocs/admin/hgcentral.sql"
#echo
#echo "reason: (describe here)"
echo
echo "NOTE: If this is an update of hgcentral that is not part of a new"
echo "build, also ask for the relevant tables to be pushed to hgdownload"
echo "for mirror site access. For example:"
echo " Please also push the hgcentral/blatServers table"
echo " from hgnfs1 --> hgdownload."
echo
exit 0