src/utils/bedToBigBed/bedToBigBed.c 1.20

Index: src/utils/bedToBigBed/bedToBigBed.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/utils/bedToBigBed/bedToBigBed.c,v
retrieving revision 1.19
retrieving revision 1.20
diff -b -B -U 4 -r1.19 -r1.20
--- src/utils/bedToBigBed/bedToBigBed.c	13 Nov 2009 23:47:02 -0000	1.19
+++ src/utils/bedToBigBed/bedToBigBed.c	16 Nov 2009 18:12:04 -0000	1.20
@@ -39,9 +39,9 @@
   "   -bedFields=N - Number of fields that fit standard bed definition.  If undefined\n"
   "                  assumes all fields in bed are defined.\n"
   "   -as=fields.as - If have non-standard fields, it's great to put a definition\n"
   "                   of each field in a row in AutoSql format here.\n"
-  "   -compress - If set use zlib compression."
+  "   -unc - If set, do not use compression."
   , bbiCurrentVersion, blockSize, itemsPerSlot
   );
 }
 
@@ -49,9 +49,9 @@
    {"blockSize", OPTION_INT},
    {"itemsPerSlot", OPTION_INT},
    {"bedFields", OPTION_INT},
    {"as", OPTION_STRING},
-   {"compress", OPTION_BOOLEAN},
+   {"unc", OPTION_BOOLEAN},
    {NULL, 0},
 };
 
 void writeBlocks(struct bbiChromUsage *usageList, struct lineFile *lf, struct asObject *as, 
@@ -647,9 +647,9 @@
 blockSize = optionInt("blockSize", blockSize);
 itemsPerSlot = optionInt("itemsPerSlot", itemsPerSlot);
 bedFields = optionInt("bedFields", bedFields);
 as = optionVal("as", as);
-doCompress = optionExists("compress");
+doCompress = !optionExists("unc");
 if (argc != 4)
     usage();
 bedToBigBed(argv[1], argv[2], argv[3]);
 optionFree();