src/hg/makeDb/schema/all.joiner 1.749

1.749 2009/12/11 22:58:05 ann
two new SCOP rules
Index: src/hg/makeDb/schema/all.joiner
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/schema/all.joiner,v
retrieving revision 1.748
retrieving revision 1.749
diff -b -B -U 4 -r1.748 -r1.749
--- src/hg/makeDb/schema/all.joiner	11 Dec 2009 18:54:09 -0000	1.748
+++ src/hg/makeDb/schema/all.joiner	11 Dec 2009 22:58:05 -0000	1.749
@@ -1371,8 +1371,19 @@
 "pfam description for each accession"
     $kgDb.pfamDesc.pfamAC
     $kgDb.knownToPfam.value
 
+identifier scopName
+"scop Domain Names"
+    $kgDb.ucscScop.domainName dupeOk
+    $kgDb.scopDesc.name full minCheck=0.60
+
+identifier scopToUcscId
+"scop Domains to UCSC Id"
+    $kgDb.kgProtMap2.qName
+    $kgDb,!hg18.ucscScop.ucscId minCheck=0.99
+    hg18.ucscScop.ucscId minCheck=0.70
+
 identifier knownIsoformCluster
 "ID of a cluster of overlapping known genes"
     $kgDb.knownCanonical.clusterId
     $kgDb.knownIsoforms.clusterId full