hiram: changes by file
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review to branch (2009-12-09 to 2009-12-14) v221
- src/hg/lib/customFactory.c
- 1.113 lines changed: 3, context: html, text, full: html, text
unlink the custom wia file after it is open so it will disappear if the loader fails
- src/hg/lib/wiggleCart.c
- 1.36 lines changed: 7, context: html, text, full: html, text
backward autoScale default for custom tracks, have autoScale on by default
- src/hg/makeDb/trackDb/README
- 1.95 lines changed: 9, context: html, text, full: html, text
Indicate the loading procedure for a bigWig file.
- src/hg/makeDb/trackDb/chainBosTau2.html
- 1.4 lines changed: 2, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/trackDb.chainNet.ra
- 1.7 lines changed: 58, context: html, text, full: html, text
felCat3 chain and nets are now composites
- 1.6 lines changed: 42, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- 1.5 lines changed: 43, context: html, text, full: html, text
bosTau3 is now ready for chainNet composite
- 1.4 lines changed: 42, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/trackDb.ra
- 1.554 lines changed: 6, context: html, text, full: html, text
felCat3 chain and nets are now composites
- 1.553 lines changed: 5, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- 1.552 lines changed: 5, context: html, text, full: html, text
bosTau3 is now ready for chainNet composite
- 1.551 lines changed: 1, context: html, text, full: html, text
add chainMinScore to the bosTau2 chain entries
- 1.550 lines changed: 32, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/dog/trackDb.chainNet.ra
- 1.2 lines changed: 3, context: html, text, full: html, text
felCat3 chain and nets are now composites
- 1.1 lines changed: 4, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- src/hg/makeDb/trackDb/human/trackDb.chainNet.ra
- 1.4 lines changed: 10, context: html, text, full: html, text
felCat3 chain and nets are now composites
- 1.3 lines changed: 5, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- 1.2 lines changed: 2, context: html, text, full: html, text
bosTau3 is now ready for chainNet composite
- 1.1 lines changed: 5, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/human/trackDb.ra
- 1.478 lines changed: 3, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/human/hg17/bosTau2.chainNet.html
- 1.2 lines changed: 153, context: html, text, full: html, text
no need to have bosTau2.chainNet here
- src/hg/makeDb/trackDb/mouse/chainBosTau2.html
- 1.3 lines changed: 1, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/mouse/trackDb.chainNet.ra
- 1.4 lines changed: 3, context: html, text, full: html, text
felCat3 chain and nets are now composites
- 1.3 lines changed: 5, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- 1.2 lines changed: 7, context: html, text, full: html, text
bosTau3 is now ready for chainNet composite
- 1.1 lines changed: 5, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/mouse/trackDb.ra
- 1.167 lines changed: 2, context: html, text, full: html, text
bosTau3 is now ready for chainNet composite
- 1.166 lines changed: 1, context: html, text, full: html, text
add chainMinScore to the bosTau2 chain entries
- 1.165 lines changed: 5, context: html, text, full: html, text
fixup chainNet priorities for bosTau2
- src/hg/makeDb/trackDb/mouse/mm7/bosTau2.chainNet.html
- 1.2 lines changed: 153, context: html, text, full: html, text
no need to have bosTau2.chainNet here
- src/hg/makeDb/trackDb/platypus/trackDb.chainNet.ra
- 1.1 lines changed: 6, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- src/hg/makeDb/trackDb/rat/trackDb.chainNet.ra
- 1.2 lines changed: 1, context: html, text, full: html, text
bosTau4 chain and net is now ready for composite
- 1.1 lines changed: 5, context: html, text, full: html, text
bosTau3 is now ready for chainNet composite
- src/hg/makeDb/trackDb/worm/trackDb.ra
- 1.39 lines changed: 6, context: html, text, full: html, text
Needed some release alpha tags to avoid errors
- src/hg/utils/phyloTrees/chainNet.pl
- 1.3 lines changed: 53, context: html, text, full: html, text
Eliminate much of the garbage from other chain tables and find appropriate tree in the phylo tree
- src/hg/utils/phyloTrees/findScores.pl
- 1.1 lines changed: 67, context: html, text, full: html, text
Check chain.csh file in lastz/blastz run for parameters
- src/product/ex.hg.conf
- 1.21 lines changed: 5, context: html, text, full: html, text
No need to mention the cookie
- 1.20 lines changed: 8, context: html, text, full: html, text
Fixup central.domain and central.cookie comments
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