src/hg/encode/DAFs/HAIBChIPseq.daf 1.2
1.2 2009/12/09 19:26:07 tdreszer
Added protocol and treatment terms
Index: src/hg/encode/DAFs/HAIBChIPseq.daf
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/DAFs/HAIBChIPseq.daf,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/encode/DAFs/HAIBChIPseq.daf 29 Oct 2009 19:26:15 -0000 1.1
+++ src/hg/encode/DAFs/HAIBChIPseq.daf 9 Dec 2009 19:26:07 -0000 1.2
@@ -1,38 +1,38 @@
# Data Agreement File for Myers/HudsonAlpha ChIP-seq experiments $Revision$
# Lab and general info
grant Myers
lab HudsonAlpha
dataType ChipSeq
-variables cell, antibody
+variables cell, antibody, protocol, antibody
assembly hg18
medianFragmentLength 225
fragmentLengthRange 150-300
dafVersion 1.1
validationSettings validateFiles.tagAlign:mmCheckOneInN=100,mismatches=2,matchFirst=32,nMatch
# Track/view definition
view Peaks
longLabelPrefix HudsonAlpha ChIP-Seq Peaks
type broadPeak
hasReplicates yes
required no
view Alignments
longLabelPrefix HudsonAlpha ChIP-Seq Alignments
type tagAlign
hasReplicates yes
required no
view RawSignal
longLabelPrefix HudsonAlpha ChIP-Seq Raw Signal
type wig
hasReplicates yes
required no
view RawData
type fastq
hasReplicates yes
required no