fanhsu: changes by file

branch to review (2009-12-01 to 2009-12-09) v221

• src/hg/hgc/hgc.c
  • 1.1582 lines changed: 2, context: html, text, full: html, text
    Added two more subtracks for Illumina SNP arrays.
  • 1.1581 lines changed: 2, context: html, text, full: html, text
    Added one line for Illumina snpArrayIlluminaHumanCytoSNP_12 chip.
• src/hg/lib/snpArrayIlluminaHuman660W_Quad.sql
  • 1.1 lines changed: 13, context: html, text, full: html, text
    Added 2 new tables for Illumina SNP array chips.
• src/hg/lib/snpArrayIlluminaHuman660W_QuadRaw.sql
  • 1.1 lines changed: 11, context: html, text, full: html, text
    Added table definition for 3 new Illumina SNP array chip raw data.
• src/hg/lib/snpArrayIlluminaHumanCytoSNP_12.sql
  • 1.1 lines changed: 13, context: html, text, full: html, text
    Added 1 table for an Illumina SNP array chip.
• src/hg/lib/snpArrayIlluminaHumanCytoSNP_12Raw.sql
  • 1.1 lines changed: 11, context: html, text, full: html, text
    Added table definition for 3 new Illumina SNP array chip raw data.
• src/hg/lib/snpArrayIlluminaHumanOmni1_Quad.sql
  • 1.1 lines changed: 13, context: html, text, full: html, text
    Added 2 new tables for Illumina SNP array chips.
• src/hg/lib/snpArrayIlluminaHumanOmni1_QuadRaw.sql
  • 1.1 lines changed: 11, context: html, text, full: html, text
    Added table definition for 3 new Illumina SNP array chip raw data.
• src/hg/makeDb/doc/hg18.txt
  • 1.390 lines changed: 87, context: html, text, full: html, text
    Added two more Illumina SNP array subtracks.
  • 1.389 lines changed: 43, context: html, text, full: html, text
    Added snpArrayIlluminaHumanCytoSNP_12 sub-track of SNP arrays track.
• src/hg/makeDb/doc/hg19.txt
  • 1.65 lines changed: 15, context: html, text, full: html, text
    Added GeneNetowrk link for hg19 hgGene page.
• src/hg/makeDb/trackDb/human/hg18/trackDb.ra
  • 1.436 lines changed: 28, context: html, text, full: html, text
    Removed snpArrayIllumina650 per Illumina's request and added 3 new Illumina SNP arrary subtracks.
• src/hg/snp/snpLoad/illuminaLookup1M.c
  • 1.2 lines changed: 9, context: html, text, full: html, text
    Updated illuminaLookup1M.c to make it work again for newer Illumina SNP array chips.