src/hg/makeDb/doc/danRer5.txt 1.19
1.19 2010/01/04 18:24:53 angie
LiftOver to danRer6
Index: src/hg/makeDb/doc/danRer5.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/danRer5.txt,v
retrieving revision 1.18
retrieving revision 1.19
diff -b -B -U 4 -r1.18 -r1.19
--- src/hg/makeDb/doc/danRer5.txt 20 Sep 2009 17:16:42 -0000 1.18
+++ src/hg/makeDb/doc/danRer5.txt 4 Jan 2010 18:24:53 -0000 1.19
@@ -3167,5 +3167,12 @@
by a single Makefile. This is available from:
svn+ssh://hgwdev.cse.ucsc.edu/projects/compbio/usr/markd/svn/projs/transMap/tags/vertebrate.2009-09-13
see doc/builds.txt for specific details.
+
+############################################################################
+# CREATE LIFTOVER CHAINS FROM danRer5 TO danRer6 (DONE 10/27/09 angie)
+ doSameSpeciesLiftOver.pl -debug danRer5 danRer6
+ cd /hive/data/genomes/danRer5/bed/blat.danRer6.2009-10-27
+ doSameSpeciesLiftOver.pl danRer5 danRer6 >& do.log & tail -f do.log
+
############################################################################