src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.14

Index: src/hg/makeDb/trackDb/trackDb.chainNet.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.chainNet.ra,v
retrieving revision 1.13
retrieving revision 1.14
diff -b -B -U 4 -r1.13 -r1.14
--- src/hg/makeDb/trackDb/trackDb.chainNet.ra	22 Dec 2009 21:14:16 -0000	1.13
+++ src/hg/makeDb/trackDb/trackDb.chainNet.ra	22 Dec 2009 21:47:49 -0000	1.14
@@ -79,8 +79,49 @@
     shortLabel $o_Organism Net
     longLabel $o_Organism ($o_date/$o_db) Alignment Net
     type netAlign tetNig2 chainTetNig2
 
+track chainNetTetNig1
+release alpha
+compositeTrack on
+shortLabel Tetraodon Chain/Net
+longLabel Tetraodon (Feb. 2004/tetNig1), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+visibilityViewDefaults chain=pack net=dense
+group compGeno
+noInherit on
+priority 159
+color 0,0,0
+altColor 255,255,0
+type bed 3
+settingsByView chain:spectrum=on
+sortOrder view=+
+matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
+matrixHeader A, C, G, T
+otherDb tetNig1
+chainMinScore 5000
+chainLinearGap loose
+spectrum on
+html chainNet
+
+    track chainTetNig1
+    release alpha
+    subTrack chainNetTetNig1
+    subGroups view=chain
+    shortLabel $o_Organism Chain
+    longLabel $o_Organism ($o_date/$o_db) Chained Alignments
+    type chain tetNig1
+
+    track netTetNig1
+    release alpha
+    subTrack chainNetTetNig1
+    subGroups view=net
+    shortLabel $o_Organism Net
+    longLabel $o_Organism ($o_date/$o_db) Alignment Net
+    type netAlign tetNig1 chainTetNig1
+
 track chainNetDanRer6
 compositeTrack on
 shortLabel Zebrafish Chain/Net
 longLabel Zebrafish (Dec. 2008/danRer6), Chain and Net Alignments