src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.30
1.30 2010/01/04 19:12:31 kent
Merging viewInTheMiddle branch.
Index: src/hg/makeDb/trackDb/trackDb.chainNet.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.chainNet.ra,v
retrieving revision 1.29
retrieving revision 1.30
diff -b -B -U 4 -r1.29 -r1.30
--- src/hg/makeDb/trackDb/trackDb.chainNet.ra 30 Dec 2009 19:50:12 -0000 1.29
+++ src/hg/makeDb/trackDb/trackDb.chainNet.ra 4 Jan 2010 19:12:31 -0000 1.30
@@ -8,16 +8,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb fr2
@@ -25,19 +23,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetFr2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetFr2
+ spectrum on
+
track chainFr2
release alpha
- subTrack chainNetFr2
+ subTrack chainNetFr2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain fr2
+ track chainNetFr2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetFr2
+
track netFr2
release alpha
- subTrack chainNetFr2
+ subTrack chainNetFr2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign fr2 chainFr2
@@ -50,16 +61,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb fr1
@@ -67,19 +76,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetFr1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetFr1
+ spectrum on
+
track chainFr1
release alpha
- subTrack chainNetFr1
+ subTrack chainNetFr1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain fr1
+ track chainNetFr1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetFr1
+
track netFr1
release alpha
- subTrack chainNetFr1
+ subTrack chainNetFr1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign fr1 chainFr1
@@ -90,16 +112,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb tetNig2
@@ -107,17 +127,30 @@
chainLinearGap loose
spectrum on
html chainNet
- track chainTetNig2
+ track chainNetTetNig2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetTetNig2
+ spectrum on
+
+ track chainTetNig2
+ subTrack chainNetTetNig2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain tetNig2
- track netTetNig2
+ track chainNetTetNig2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetTetNig2
+
+ track netTetNig2
+ subTrack chainNetTetNig2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign tetNig2 chainTetNig2
@@ -129,16 +162,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb tetNig1
@@ -146,19 +177,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetTetNig1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetTetNig1
+ spectrum on
+
track chainTetNig1
release alpha
- subTrack chainNetTetNig1
+ subTrack chainNetTetNig1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain tetNig1
+ track chainNetTetNig1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetTetNig1
+
track netTetNig1
release alpha
- subTrack chainNetTetNig1
+ subTrack chainNetTetNig1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign tetNig1 chainTetNig1
@@ -169,16 +213,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb danRer6
@@ -186,17 +228,30 @@
chainLinearGap loose
spectrum on
html chainNet
- track chainDanRer6
+ track chainNetDanRer6Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetDanRer6
+ spectrum on
+
+ track chainDanRer6
+ subTrack chainNetDanRer6Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain danRer6
- track netDanRer6
+ track chainNetDanRer6Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetDanRer6
+
+ track netDanRer6
+ subTrack chainNetDanRer6Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign danRer6 chainDanRer6
@@ -208,16 +263,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb danRer5
@@ -225,19 +278,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetDanRer5Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetDanRer5
+ spectrum on
+
track chainDanRer5
release alpha
- subTrack chainNetDanRer5
+ subTrack chainNetDanRer5Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain danRer5
+ track chainNetDanRer5Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetDanRer5
+
track netDanRer5
release alpha
- subTrack chainNetDanRer5
+ subTrack chainNetDanRer5Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign danRer5 chainDanRer5
@@ -249,16 +315,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb danRer4
@@ -266,19 +330,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetDanRer4Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetDanRer4
+ spectrum on
+
track chainDanRer4
release alpha
- subTrack chainNetDanRer4
+ subTrack chainNetDanRer4Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain danRer4
+ track chainNetDanRer4Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetDanRer4
+
track netDanRer4
release alpha
- subTrack chainNetDanRer4
+ subTrack chainNetDanRer4Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign danRer4 chainDanRer4
@@ -290,16 +367,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb danRer3
@@ -307,19 +382,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetDanRer3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetDanRer3
+ spectrum on
+
track chainDanRer3
release alpha
- subTrack chainNetDanRer3
+ subTrack chainNetDanRer3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain danRer3
+ track chainNetDanRer3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetDanRer3
+
track netDanRer3
release alpha
- subTrack chainNetDanRer3
+ subTrack chainNetDanRer3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign danRer3 chainDanRer3
@@ -331,16 +419,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb danRer2
@@ -348,19 +434,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetDanRer2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetDanRer2
+ spectrum on
+
track chainDanRer2
release alpha
- subTrack chainNetDanRer2
+ subTrack chainNetDanRer2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain danRer2
+ track chainNetDanRer2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetDanRer2
+
track netDanRer2
release alpha
- subTrack chainNetDanRer2
+ subTrack chainNetDanRer2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign danRer2 chainDanRer2
@@ -372,16 +471,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb danRer1
@@ -389,19 +486,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetDanRer1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetDanRer1
+ spectrum on
+
track chainDanRer1
release alpha
- subTrack chainNetDanRer1
+ subTrack chainNetDanRer1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain danRer1
+ track chainNetDanRer1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetDanRer1
+
track netDanRer1
release alpha
- subTrack chainNetDanRer1
+ subTrack chainNetDanRer1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign danRer1 chainDanRer1
@@ -413,16 +523,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb xenTro2
@@ -430,19 +538,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetXenTro2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetXenTro2
+ spectrum on
+
track chainXenTro2
release alpha
- subTrack chainNetXenTro2
+ subTrack chainNetXenTro2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain xenTro2
+ track chainNetXenTro2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetXenTro2
+
track netXenTro2
release alpha
- subTrack chainNetXenTro2
+ subTrack chainNetXenTro2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign xenTro2 chainXenTro2
@@ -454,16 +575,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 159
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb xenTro1
@@ -471,19 +590,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetXenTro1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetXenTro1
+ spectrum on
+
track chainXenTro1
release alpha
- subTrack chainNetXenTro1
+ subTrack chainNetXenTro1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain xenTro1
+ track chainNetXenTro1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetXenTro1
+
track netXenTro1
release alpha
- subTrack chainNetXenTro1
+ subTrack chainNetXenTro1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign xenTro1 chainXenTro1
@@ -496,36 +628,47 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 165.5
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb oryLat2
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetOryLat2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetOryLat2
+ spectrum on
+
track chainOryLat2
release alpha
- subTrack chainNetOryLat2
+ subTrack chainNetOryLat2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain oryLat2
otherDb oryLat2
+ track chainNetOryLat2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetOryLat2
+
track netOryLat2
release alpha
- subTrack chainNetOryLat2
+ subTrack chainNetOryLat2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign oryLat2 chainOryLat2
@@ -539,36 +682,47 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 165.5
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb oryLat1
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetOryLat1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetOryLat1
+ spectrum on
+
track chainOryLat1
release alpha
- subTrack chainNetOryLat1
+ subTrack chainNetOryLat1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain oryLat1
otherDb oryLat1
+ track chainNetOryLat1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetOryLat1
+
track netOryLat1
release alpha
- subTrack chainNetOryLat1
+ subTrack chainNetOryLat1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign oryLat1 chainOryLat1
@@ -582,16 +736,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 181
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb gasAcu1
@@ -599,19 +751,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetGasAcu1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetGasAcu1
+ spectrum on
+
track chainGasAcu1
release alpha
- subTrack chainNetGasAcu1
+ subTrack chainNetGasAcu1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain gasAcu1
+ track chainNetGasAcu1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetGasAcu1
+
track netGasAcu1
release alpha
- subTrack chainNetGasAcu1
+ subTrack chainNetGasAcu1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign gasAcu1 chainGasAcu1
@@ -624,16 +789,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 181
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb galGal3
@@ -641,19 +804,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetGalGal3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetGalGal3
+ spectrum on
+
track chainGalGal3
release alpha
- subTrack chainNetGalGal3
+ subTrack chainNetGalGal3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain galGal3
+ track chainNetGalGal3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetGalGal3
+
track netGalGal3
release alpha
- subTrack chainNetGalGal3
+ subTrack chainNetGalGal3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign galGal3 chainGalGal3
@@ -666,16 +842,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 181
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb galGal2
@@ -683,19 +857,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetGalGal2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetGalGal2
+ spectrum on
+
track chainGalGal2
release alpha
- subTrack chainNetGalGal2
+ subTrack chainNetGalGal2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain galGal2
+ track chainNetGalGal2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetGalGal2
+
track netGalGal2
release alpha
- subTrack chainNetGalGal2
+ subTrack chainNetGalGal2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign galGal2 chainGalGal2
@@ -708,16 +895,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 181
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb taeGut1
@@ -725,19 +910,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetTaeGut1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetTaeGut1
+ spectrum on
+
track chainTaeGut1
release alpha
- subTrack chainNetTaeGut1
+ subTrack chainNetTaeGut1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain taeGut1
+ track chainNetTaeGut1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetTaeGut1
+
track netTaeGut1
release alpha
- subTrack chainNetTaeGut1
+ subTrack chainNetTaeGut1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign taeGut1 chainTaeGut1
@@ -750,16 +948,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb ornAna1
@@ -767,19 +963,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetOrnAna1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetOrnAna1
+ spectrum on
+
track chainOrnAna1
release alpha
- subTrack chainNetOrnAna1
+ subTrack chainNetOrnAna1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain ornAna1
+ track chainNetOrnAna1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetOrnAna1
+
track netOrnAna1
release alpha
- subTrack chainNetOrnAna1
+ subTrack chainNetOrnAna1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign ornAna1 chainOrnAna1
@@ -792,16 +1001,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb anoCar1
@@ -809,19 +1016,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetAnoCar1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetAnoCar1
+ spectrum on
+
track chainAnoCar1
release alpha
- subTrack chainNetAnoCar1
+ subTrack chainNetAnoCar1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain anoCar1
+ track chainNetAnoCar1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetAnoCar1
+
track netAnoCar1
release alpha
- subTrack chainNetAnoCar1
+ subTrack chainNetAnoCar1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign anoCar1 chainAnoCar1
@@ -834,16 +1054,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb petMar1
@@ -851,19 +1069,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetPetMar1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetPetMar1
+ spectrum on
+
track chainPetMar1
release alpha
- subTrack chainNetPetMar1
+ subTrack chainNetPetMar1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain petMar1
+ track chainNetPetMar1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetPetMar1
+
track netPetMar1
release alpha
- subTrack chainNetPetMar1
+ subTrack chainNetPetMar1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign petMar1 chainPetMar1
@@ -876,16 +1107,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb braFlo1
@@ -893,19 +1122,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetBraFlo1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetBraFlo1
+ spectrum on
+
track chainBraFlo1
release alpha
- subTrack chainNetBraFlo1
+ subTrack chainNetBraFlo1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain braFlo1
+ track chainNetBraFlo1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetBraFlo1
+
track netBraFlo1
release alpha
- subTrack chainNetBraFlo1
+ subTrack chainNetBraFlo1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign braFlo1 chainBraFlo1
@@ -916,16 +1158,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb loxAfr3
@@ -933,17 +1173,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainLoxAfr3
+ track chainNetLoxAfr3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetLoxAfr3
+ spectrum on
+
+ track chainLoxAfr3
+ subTrack chainNetLoxAfr3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain loxAfr3
- track netLoxAfr3
+ track chainNetLoxAfr3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetLoxAfr3
+
+ track netLoxAfr3
+ subTrack chainNetLoxAfr3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign loxAfr3 chainLoxAfr3
@@ -954,16 +1207,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb loxAfr2
@@ -971,17 +1222,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainLoxAfr2
+ track chainNetLoxAfr2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetLoxAfr2
+ spectrum on
+
+ track chainLoxAfr2
+ subTrack chainNetLoxAfr2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain loxAfr2
- track netLoxAfr2
+ track chainNetLoxAfr2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetLoxAfr2
+
+ track netLoxAfr2
+ subTrack chainNetLoxAfr2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign loxAfr2 chainLoxAfr2
@@ -992,16 +1256,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb loxAfr1
@@ -1009,17 +1271,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainLoxAfr1
+ track chainNetLoxAfr1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetLoxAfr1
+ spectrum on
+
+ track chainLoxAfr1
+ subTrack chainNetLoxAfr1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain loxAfr1
- track netLoxAfr1
+ track chainNetLoxAfr1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetLoxAfr1
+
+ track netLoxAfr1
+ subTrack chainNetLoxAfr1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign loxAfr1 chainLoxAfr1
@@ -1031,16 +1306,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb monDom1
@@ -1048,19 +1321,32 @@
chainLinearGap loose
spectrum on
html chainNet
+ track chainNetMonDom1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetMonDom1
+ spectrum on
+
track chainMonDom1
release alpha
- subTrack chainNetMonDom1
+ subTrack chainNetMonDom1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain monDom1
+ track chainNetMonDom1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetMonDom1
+
track netMonDom1
release alpha
- subTrack chainNetMonDom1
+ subTrack chainNetMonDom1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign monDom1 chainMonDom1
@@ -1072,16 +1358,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
matrixHeader A, C, G, T
otherDb monDom4
@@ -1089,19 +1373,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetMonDom4Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetMonDom4
+ spectrum on
+
track chainMonDom4
release alpha
- subTrack chainNetMonDom4
+ subTrack chainNetMonDom4Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain monDom4
+ track chainNetMonDom4Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetMonDom4
+
track netMonDom4
release alpha
- subTrack chainNetMonDom4
+ subTrack chainNetMonDom4Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign monDom4 chainMonDom4
@@ -1112,16 +1409,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb monDom5
@@ -1129,17 +1424,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainMonDom5
+ track chainNetMonDom5Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetMonDom5
+ spectrum on
+
+ track chainMonDom5
+ subTrack chainNetMonDom5Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain monDom5
- track netMonDom5
+ track chainNetMonDom5Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetMonDom5
+
+ track netMonDom5
+ subTrack chainNetMonDom5Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign monDom5 chainMonDom5
@@ -1150,16 +1458,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 191
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb eriEur1
@@ -1167,17 +1473,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainEriEur1
+ track chainNetEriEur1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetEriEur1
+ spectrum on
+
+ track chainEriEur1
+ subTrack chainNetEriEur1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain eriEur1
- track netEriEur1
+ track chainNetEriEur1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetEriEur1
+
+ track netEriEur1
+ subTrack chainNetEriEur1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign eriEur1 chainEriEur1
@@ -1188,16 +1507,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb sorAra1
@@ -1205,17 +1522,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainSorAra1
+ track chainNetSorAra1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetSorAra1
+ spectrum on
+
+ track chainSorAra1
+ subTrack chainNetSorAra1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain sorAra1
- track netSorAra1
+ track chainNetSorAra1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetSorAra1
+
+ track netSorAra1
+ subTrack chainNetSorAra1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign sorAra1 chainSorAra1
@@ -1228,16 +1558,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb mm9
@@ -1245,19 +1573,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetMm9Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetMm9
+ spectrum on
+
track chainMm9
release alpha
- subTrack chainNetMm9
+ subTrack chainNetMm9Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain mm9
+ track chainNetMm9Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetMm9
+
track netMm9
release alpha
- subTrack chainNetMm9
+ subTrack chainNetMm9Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign mm9 chainMm9
@@ -1270,16 +1611,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb mm8
@@ -1287,19 +1626,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetMm8Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetMm8
+ spectrum on
+
track chainMm8
release alpha
- subTrack chainNetMm8
+ subTrack chainNetMm8Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain mm8
+ track chainNetMm8Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetMm8
+
track netMm8
release alpha
- subTrack chainNetMm8
+ subTrack chainNetMm8Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign mm8 chainMm8
@@ -1312,16 +1664,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb mm7
@@ -1329,19 +1679,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetMm7Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetMm7
+ spectrum on
+
track chainMm7
release alpha
- subTrack chainNetMm7
+ subTrack chainNetMm7Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain mm7
+ track chainNetMm7Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetMm7
+
track netMm7
release alpha
- subTrack chainNetMm7
+ subTrack chainNetMm7Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign mm7 chainMm7
@@ -1354,16 +1717,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb mm6
@@ -1371,19 +1732,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetMm6Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetMm6
+ spectrum on
+
track chainMm6
release alpha
- subTrack chainNetMm6
+ subTrack chainNetMm6Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain mm6
+ track chainNetMm6Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetMm6
+
track netMm6
release alpha
- subTrack chainNetMm6
+ subTrack chainNetMm6Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign mm6 chainMm6
@@ -1396,16 +1770,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb rn4
@@ -1413,19 +1785,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetRn4Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetRn4
+ spectrum on
+
track chainRn4
release alpha
- subTrack chainNetRn4
+ subTrack chainNetRn4Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain rn4
+ track chainNetRn4Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetRn4
+
track netRn4
release alpha
- subTrack chainNetRn4
+ subTrack chainNetRn4Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign rn4 chainRn4
@@ -1438,16 +1823,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb rn3
@@ -1455,19 +1838,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetRn3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetRn3
+ spectrum on
+
track chainRn3
release alpha
- subTrack chainNetRn3
+ subTrack chainNetRn3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain rn3
+ track chainNetRn3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetRn3
+
track netRn3
release alpha
- subTrack chainNetRn3
+ subTrack chainNetRn3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign rn3 chainRn3
@@ -1480,16 +1876,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb cavPor3
@@ -1497,19 +1891,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetCavPor3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetCavPor3
+ spectrum on
+
track chainCavPor3
release alpha
- subTrack chainNetCavPor3
+ subTrack chainNetCavPor3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain cavPor3
+ track chainNetCavPor3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetCavPor3
+
track netCavPor3
release alpha
- subTrack chainNetCavPor3
+ subTrack chainNetCavPor3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign cavPor3 chainCavPor3
@@ -1522,16 +1929,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb cavPor2
@@ -1539,19 +1944,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetCavPor2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetCavPor2
+ spectrum on
+
track chainCavPor2
release alpha
- subTrack chainNetCavPor2
+ subTrack chainNetCavPor2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain cavPor2
+ track chainNetCavPor2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetCavPor2
+
track netCavPor2
release alpha
- subTrack chainNetCavPor2
+ subTrack chainNetCavPor2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign cavPor2 chainCavPor2
@@ -1562,16 +1980,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb oryCun2
@@ -1579,17 +1995,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainOryCun2
+ track chainNetOryCun2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetOryCun2
+ spectrum on
+
+ track chainOryCun2
+ subTrack chainNetOryCun2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain oryCun2
- track netOryCun2
+ track chainNetOryCun2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetOryCun2
+
+ track netOryCun2
+ subTrack chainNetOryCun2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign oryCun2 chainOryCun2
@@ -1600,16 +2029,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 209
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb oryCun1
@@ -1617,17 +2044,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainOryCun1
+ track chainNetOryCun1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetOryCun1
+ spectrum on
+
+ track chainOryCun1
+ subTrack chainNetOryCun1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain oryCun1
- track netOryCun1
+ track chainNetOryCun1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetOryCun1
+
+ track netOryCun1
+ subTrack chainNetOryCun1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign oryCun1 chainOryCun1
@@ -1638,16 +2078,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb equCab2
@@ -1655,17 +2093,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainEquCab2
+ track chainNetEquCab2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetEquCab2
+ spectrum on
+
+ track chainEquCab2
+ subTrack chainNetEquCab2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain equCab2
- track netEquCab2
+ track chainNetEquCab2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetEquCab2
+
+ track netEquCab2
+ subTrack chainNetEquCab2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign equCab2 chainEquCab2
@@ -1677,16 +2128,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb equCab1
@@ -1694,19 +2143,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetEquCab1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetEquCab1
+ spectrum on
+
track chainEquCab1
release alpha
- subTrack chainNetEquCab1
+ subTrack chainNetEquCab1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain equCab1
+ track chainNetEquCab1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetEquCab1
+
track netEquCab1
release alpha
- subTrack chainNetEquCab1
+ subTrack chainNetEquCab1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign equCab1 chainEquCab1
@@ -1717,16 +2179,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb echTel1
@@ -1734,17 +2194,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainEchTel1
+ track chainNetEchTel1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetEchTel1
+ spectrum on
+
+ track chainEchTel1
+ subTrack chainNetEchTel1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain echTel1
- track netEchTel1
+ track chainNetEchTel1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetEchTel1
+
+ track netEchTel1
+ subTrack chainNetEchTel1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign echTel1 chainEchTel1
@@ -1755,16 +2228,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb dasNov2
@@ -1772,17 +2243,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainDasNov2
+ track chainNetDasNov2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetDasNov2
+ spectrum on
+
+ track chainDasNov2
+ subTrack chainNetDasNov2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain dasNov2
- track netDasNov2
+ track chainNetDasNov2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetDasNov2
+
+ track netDasNov2
+ subTrack chainNetDasNov2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign dasNov2 chainDasNov2
@@ -1793,16 +2277,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb dasNov1
@@ -1810,17 +2292,30 @@
chainLinearGap medium
spectrum on
html chainNet
- track chainDasNov1
+ track chainNetDasNov1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetDasNov1
+ spectrum on
+
+ track chainDasNov1
+ subTrack chainNetDasNov1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain dasNov1
- track netDasNov1
+ track chainNetDasNov1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetDasNov1
+
+ track netDasNov1
+ subTrack chainNetDasNov1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign dasNov1 chainDasNov1
@@ -1833,16 +2328,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb bosTau4
@@ -1850,19 +2343,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetBosTau4Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetBosTau4
+ spectrum on
+
track chainBosTau4
release alpha
- subTrack chainNetBosTau4
+ subTrack chainNetBosTau4Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain bosTau4
+ track chainNetBosTau4Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetBosTau4
+
track netBosTau4
release alpha
- subTrack chainNetBosTau4
+ subTrack chainNetBosTau4Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign bosTau4 chainBosTau4
@@ -1875,16 +2381,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb bosTau3
@@ -1892,19 +2396,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetBosTau3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetBosTau3
+ spectrum on
+
track chainBosTau3
release alpha
- subTrack chainNetBosTau3
+ subTrack chainNetBosTau3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain bosTau3
+ track chainNetBosTau3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetBosTau3
+
track netBosTau3
release alpha
- subTrack chainNetBosTau3
+ subTrack chainNetBosTau3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign bosTau3 chainBosTau3
@@ -1917,16 +2434,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb bosTau2
@@ -1934,19 +2449,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetBosTau2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetBosTau2
+ spectrum on
+
track chainBosTau2
release alpha
- subTrack chainNetBosTau2
+ subTrack chainNetBosTau2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain bosTau2
+ track chainNetBosTau2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetBosTau2
+
track netBosTau2
release alpha
- subTrack chainNetBosTau2
+ subTrack chainNetBosTau2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign bosTau2 chainBosTau2
@@ -1957,16 +2485,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb bosTau1
@@ -1974,17 +2500,30 @@
chainLinearGap loose
spectrum on
html chainNet
- track chainBosTau1
+ track chainNetBosTau1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetBosTau1
+ spectrum on
+
+ track chainBosTau1
+ subTrack chainNetBosTau1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain bosTau1
- track netBosTau1
+ track chainNetBosTau1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetBosTau1
+
+ track netBosTau1
+ subTrack chainNetBosTau1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign bosTau1 chainBosTau1
@@ -1997,16 +2536,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb canFam2
@@ -2014,19 +2551,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetCanFam2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetCanFam2
+ spectrum on
+
track chainCanFam2
release alpha
- subTrack chainNetCanFam2
+ subTrack chainNetCanFam2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain canFam2
+ track chainNetCanFam2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetCanFam2
+
track netCanFam2
release alpha
- subTrack chainNetCanFam2
+ subTrack chainNetCanFam2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign canFam2 chainCanFam2
@@ -2039,16 +2589,14 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 240
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb felCat3
@@ -2056,19 +2604,32 @@
chainLinearGap medium
spectrum on
html chainNet
+ track chainNetFelCat3Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetFelCat3
+ spectrum on
+
track chainFelCat3
release alpha
- subTrack chainNetFelCat3
+ subTrack chainNetFelCat3Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain felCat3
+ track chainNetFelCat3Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetFelCat3
+
track netFelCat3
release alpha
- subTrack chainNetFelCat3
+ subTrack chainNetFelCat3Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign felCat3 chainFelCat3
@@ -2079,20 +2640,25 @@
longLabel J. Craig Venter Chain and Net Alignments
subGroup1 view Views chain=Chains net=Nets
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 500
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
+ track chainNetVenterViewchain
+ shortLabel Chains
+ view chain
+ visibility pack
+ subTrack chainNetVenter
+ spectrum on
+
track chainVenter1
- subTrack chainNetVenter off
+ subTrack chainNetVenterViewchain off
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
color 100,50,0
@@ -2101,10 +2667,16 @@
matrixHeader A, C, G, T
type chain venter1
otherDb venter1
+ track chainNetVenterViewnet
+ shortLabel Nets
+ view net
+ visibility dense
+ subTrack chainNetVenter
+
track netVenter1
- subTrack chainNetVenter off
+ subTrack chainNetVenterViewnet off
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign venter1 chainVenter1
@@ -2117,35 +2689,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
matrixHeader A, C, G, T
otherDb hg18
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetHg18Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetHg18
+ spectrum on
+
track chainHg18
release alpha
- subTrack chainNetHg18
+ subTrack chainNetHg18Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain hg18
+ track chainNetHg18Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetHg18
+
track netHg18
release alpha
- subTrack chainNetHg18
+ subTrack chainNetHg18Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign hg18 chainHg18
@@ -2156,33 +2739,44 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
matrixHeader A, C, G, T
otherDb hg19
chainMinScore 3000
chainLinearGap medium
html chainNet
- track chainHg19
+ track chainNetHg19Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetHg19
+ spectrum on
+
+ track chainHg19
+ subTrack chainNetHg19Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain hg19
- track netHg19
+ track chainNetHg19Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetHg19
+
+ track netHg19
+ subTrack chainNetHg19Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign hg19 chainHg19
@@ -2194,35 +2788,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb hg17
chainMinScore 1000
chainLinearGap loose
html chainNet
+ track chainNetHg17Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetHg17
+ spectrum on
+
track chainHg17
release alpha
- subTrack chainNetHg17
+ subTrack chainNetHg17Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain hg17
+ track chainNetHg17Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetHg17
+
track netHg17
release alpha
- subTrack chainNetHg17
+ subTrack chainNetHg17Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign hg17 chainHg17
@@ -2234,35 +2839,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
matrixHeader A, C, G, T
otherDb panTro2
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetPanTro2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetPanTro2
+ spectrum on
+
track chainPanTro2
release alpha
- subTrack chainNetPanTro2
+ subTrack chainNetPanTro2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain panTro2
+ track chainNetPanTro2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetPanTro2
+
track netPanTro2
release alpha
- subTrack chainNetPanTro2
+ subTrack chainNetPanTro2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign panTro2 chainPanTro2
@@ -2274,35 +2890,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
matrixHeader A, C, G, T
otherDb panTro1
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetPanTro1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetPanTro1
+ spectrum on
+
track chainPanTro1
release alpha
- subTrack chainNetPanTro1
+ subTrack chainNetPanTro1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain panTro1
+ track chainNetPanTro1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetPanTro1
+
track netPanTro1
release alpha
- subTrack chainNetPanTro1
+ subTrack chainNetPanTro1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign panTro1 chainPanTro1
@@ -2313,33 +2940,44 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb gorGor1
chainMinScore 3000
chainLinearGap medium
html chainNet
- track chainGorGor1
+ track chainNetGorGor1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetGorGor1
+ spectrum on
+
+ track chainGorGor1
+ subTrack chainNetGorGor1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain gorGor1
- track netGorGor1
+ track chainNetGorGor1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetGorGor1
+
+ track netGorGor1
+ subTrack chainNetGorGor1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign gorGor1 chainGorGor1
@@ -2351,35 +2989,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
matrixHeader A, C, G, T
otherDb ponAbe2
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetPonAbe2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetPonAbe2
+ spectrum on
+
track chainPonAbe2
release alpha
- subTrack chainNetPonAbe2
+ subTrack chainNetPonAbe2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain ponAbe2
+ track chainNetPonAbe2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetPonAbe2
+
track netPonAbe2
release alpha
- subTrack chainNetPonAbe2
+ subTrack chainNetPonAbe2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign ponAbe2 chainPonAbe2
@@ -2390,33 +3039,44 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb tupBel1
chainMinScore 3000
chainLinearGap medium
html chainNet
- track chainTupBel1
+ track chainNetTupBel1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetTupBel1
+ spectrum on
+
+ track chainTupBel1
+ subTrack chainNetTupBel1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain tupBel1
- track netTupBel1
+ track chainNetTupBel1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetTupBel1
+
+ track netTupBel1
+ subTrack chainNetTupBel1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign tupBel1 chainTupBel1
@@ -2427,33 +3087,44 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb otoGar1
chainMinScore 3000
chainLinearGap medium
html chainNet
- track chainOtoGar1
+ track chainNetOtoGar1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
subTrack chainNetOtoGar1
+ spectrum on
+
+ track chainOtoGar1
+ subTrack chainNetOtoGar1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain otoGar1
- track netOtoGar1
+ track chainNetOtoGar1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
subTrack chainNetOtoGar1
+
+ track netOtoGar1
+ subTrack chainNetOtoGar1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign otoGar1 chainOtoGar1
@@ -2465,35 +3136,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb calJac1
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetCalJac1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetCalJac1
+ spectrum on
+
track chainCalJac1
release alpha
- subTrack chainNetCalJac1
+ subTrack chainNetCalJac1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain calJac1
+ track chainNetCalJac1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetCalJac1
+
track netCalJac1
release alpha
- subTrack chainNetCalJac1
+ subTrack chainNetCalJac1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign calJac1 chainCalJac1
@@ -2505,35 +3187,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb rheMac2
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetRheMac2Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetRheMac2
+ spectrum on
+
track chainRheMac2
release alpha
- subTrack chainNetRheMac2
+ subTrack chainNetRheMac2Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain rheMac2
+ track chainNetRheMac2Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetRheMac2
+
track netRheMac2
release alpha
- subTrack chainNetRheMac2
+ subTrack chainNetRheMac2Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign rheMac2 chainRheMac2
@@ -2545,35 +3238,46 @@
longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
subGroup1 view Views chain=Chain net=Net
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 498
color 100,50,0
altColor 255,240,200
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
matrixHeader A, C, G, T
otherDb rheMac1
chainMinScore 3000
chainLinearGap medium
html chainNet
+ track chainNetRheMac1Viewchain
+ shortLabel Chain
+ view chain
+ visibility pack
+ subTrack chainNetRheMac1
+ spectrum on
+
track chainRheMac1
release alpha
- subTrack chainNetRheMac1
+ subTrack chainNetRheMac1Viewchain
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
type chain rheMac1
+ track chainNetRheMac1Viewnet
+ shortLabel Net
+ view net
+ visibility dense
+ subTrack chainNetRheMac1
+
track netRheMac1
release alpha
- subTrack chainNetRheMac1
+ subTrack chainNetRheMac1Viewnet
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment net
type netAlign rheMac1 chainRheMac1
@@ -2584,20 +3288,25 @@
longLabel Poodle Chain and Net Alignments
subGroup1 view Views chain=Chains net=Nets
dragAndDrop subTracks
visibility hide
-visibilityViewDefaults chain=pack net=dense
group compGeno
noInherit on
priority 500
color 0,0,0
altColor 255,255,0
type bed 3
-settingsByView chain:spectrum=on
sortOrder view=+
+ track chainNetPoodleViewchain
+ shortLabel Chains
+ view chain
+ visibility pack
+ subTrack chainNetPoodle
+ spectrum on
+
track chainCanFamPoodle1
- subTrack chainNetPoodle off
+ subTrack chainNetPoodleViewchain off
subGroups view=chain
shortLabel $o_Organism Chain
longLabel $o_Organism ($o_date/$o_db) Chained Alignments
color 100,50,0
@@ -2606,10 +3315,16 @@
matrixHeader A, C, G, T
type chain canFamPoodle1
otherDb canFamPoodle1
+ track chainNetPoodleViewnet
+ shortLabel Nets
+ view net
+ visibility dense
+ subTrack chainNetPoodle
+
track netCanFamPoodle1
- subTrack chainNetPoodle off
+ subTrack chainNetPoodleViewnet off
subGroups view=net
shortLabel $o_Organism Net
longLabel $o_Organism ($o_date/$o_db) Alignment Net
type netAlign canFamPoodle1 chainCanFamPoodle1