src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.8

Index: src/hg/makeDb/trackDb/trackDb.chainNet.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.chainNet.ra,v
retrieving revision 1.7
retrieving revision 1.8
diff -b -B -U 4 -r1.7 -r1.8
--- src/hg/makeDb/trackDb/trackDb.chainNet.ra	11 Dec 2009 23:51:26 -0000	1.7
+++ src/hg/makeDb/trackDb/trackDb.chainNet.ra	18 Dec 2009 20:19:46 -0000	1.8
@@ -286,8 +286,49 @@
     shortLabel $o_Organism Net
     longLabel $o_Organism ($o_date/$o_db) Alignment Net
     type netAlign ornAna1 chainOrnAna1
 
+track chainNetMonDom1
+release alpha
+compositeTrack on
+shortLabel Opossum Chain/Net
+longLabel Opossum (Oct. 2004/monDom1), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+visibilityViewDefaults chain=pack net=dense
+group compGeno
+noInherit on
+priority 191
+color 100,50,0
+altColor 255,240,200
+type bed 3
+settingsByView chain:spectrum=on
+sortOrder view=+
+matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
+matrixHeader A, C, G, T
+otherDb monDom1
+chainMinScore 5000
+chainLinearGap loose
+spectrum on
+html chainNet
+
+    track chainMonDom1
+    release alpha
+    subTrack chainNetMonDom1
+    subGroups view=chain
+    shortLabel $o_Organism Chain
+    longLabel $o_Organism ($o_date/$o_db) Chained Alignments
+    type chain monDom1
+
+    track netMonDom1
+    release alpha
+    subTrack chainNetMonDom1
+    subGroups view=net
+    shortLabel $o_Organism Net
+    longLabel $o_Organism ($o_date/$o_db) Alignment Net
+    type netAlign monDom1 chainMonDom1
+
 track chainNetMonDom4
 release alpha
 compositeTrack on
 shortLabel Opossum Chain/Net