src/hg/encode/DAFs/UMass5C.DDF 1.2
1.2 2010/01/16 04:11:23 kate
2nd cut of Dekker lab files
Index: src/hg/encode/DAFs/UMass5C.DDF
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/DAFs/UMass5C.DDF,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/encode/DAFs/UMass5C.DDF 12 Nov 2008 21:03:05 -0000 1.1
+++ src/hg/encode/DAFs/UMass5C.DDF 16 Jan 2010 04:11:23 -0000 1.2
@@ -1,11 +1,9 @@
-files view cell labVersion replicate softwareVersion
-K562/5C_array_K562.ppk Interactions K562 peak5c-v1.0
-K562/5C_array_K562.bed InteractionSites K562
-K562/5C_array_K562_rep1.ppk RawInteractions K562 1 peak5c-v1.0
-K562/5C_array_K562_rep1.bed RawInteractionSites K562 1
-K562/5C_array_K562_rep1.wig RawSignal K562 1
-K562/5C_array_K562_rep1.cel RawData K562 1
-K562/5C_array_K562_rep2.ppk RawInteractions K562 2 peak5c-v1.0
-K562/5C_array_K562_rep2.bed RawInteractionSites K562 2
-K562/5C_array_K562_rep2.wig RawSignal K562 2
-K562/5C_array_K562_rep2.cel RawData K562 2
+files view cell replicate
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/bed/ENM_GM12878_R1_RAW_BED.bed Interactions GM12878 1
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/bed/ENM_GM12878_R2_RAW_BED.bed Interactions GM12878 2
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/bed/ENM_K562_R1_RAW_BED.bed Interactions K562 1
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/bed/ENM_K562_R2_RAW_BED.bed Interactions K562 2
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/matrix/ENM_GM12878_R1_RAW_MATRIX.txt Matrix GM12878 1
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/matrix/ENM_GM12878_R2_RAW_MATRIX.txt Matrix GM12878 2
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/matrix/ENM_K562_R1_RAW_MATRIX.txt Matrix K562 1
+./UMASS-5C_ENM-TSS_JAN2010_FREEZE/data/matrix/ENM_K562_R2_RAW_MATRIX.txt Matrix K562 2