braney: changes by file

review to branch (2010-01-12 to 2010-01-19) v223

• src/hg/encode/encodeValidate/config/cv.ra
  • 1.195 lines changed: 10, context: html, text, full: html, text
    add 1x25 readType and bow10 mapping method
  • 1.192 lines changed: 6, context: html, text, full: html, text
    add insertLength of 400
  • 1.184 lines changed: 5, context: html, text, full: html, text
    add 1x75D
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.774 lines changed: 1, context: html, text, full: html, text
    forgot the big on the bed again...
  • 1.773 lines changed: 10, context: html, text, full: html, text
    ENCODE RIKEN CAGE Tags (longNonPolyA in H1-hESC cell) alignments
  • 1.771 lines changed: 2, context: html, text, full: html, text
    oops... need a bigBed on that last commit
  • 1.770 lines changed: 41, context: html, text, full: html, text
    ENCODE RIKEN CAGE Tags (longNonPolyA in NHEK nucleus)
  • 1.769 lines changed: 21, context: html, text, full: html, text
    Riken CAGE Gm12878Nucleolus signals
  • 1.768 lines changed: 21, context: html, text, full: html, text
    ENCODE Riken CAGE H1hESC
  • 1.767 lines changed: 20, context: html, text, full: html, text
    CSHL short RNA-seq GM12878 K562 whole cell
  • 1.766 lines changed: 20, context: html, text, full: html, text
    add RIKEN CAGE plus and minus clusters for HUVEC cytosol
  • 1.765 lines changed: 11, context: html, text, full: html, text
    RIKEN Rna-seq GM12878 nucleolus
  • 1.764 lines changed: 11, context: html, text, full: html, text
    Riken RNA-seq HUVEC alignments
  • 1.763 lines changed: 51, context: html, text, full: html, text
    add CalTech RNA-seq NHEK directional 1x75
  • 1.762 lines changed: 30, context: html, text, full: html, text
    Caltech RNA-seq H1hesc paired end
  • 1.760 lines changed: 1, context: html, text, full: html, text
    fix silly toed typo
  • 1.759 lines changed: 52, context: html, text, full: html, text
    adding H1hesc directional to Caltech RNA-seq