src/hg/archaeStuff/scripts/make-browser-2.0 1.51

Index: src/hg/archaeStuff/scripts/make-browser-2.0
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/archaeStuff/scripts/make-browser-2.0,v
retrieving revision 1.50
retrieving revision 1.51
diff -b -B -U 4 -r1.50 -r1.51
--- src/hg/archaeStuff/scripts/make-browser-2.0	12 Oct 2009 06:58:04 -0000	1.50
+++ src/hg/archaeStuff/scripts/make-browser-2.0	7 Jan 2010 02:57:54 -0000	1.51
@@ -140,9 +140,9 @@
     if ($opt_joinassembly)         { &Join_assemblies(\%global_vars); }
     if ($opt_hidedb)               { &Hide_org_db(\%global_vars); }
     if ($opt_droptable ne '')      { &Drop_org_table(\%global_vars, $opt_droptable); }
 
-    if (!-d $global_constants->cluster_data_dir()."/".$organism->db_name())
+    if ((!-d $global_constants->cluster_data_dir()."/".$organism->db_name()) && ($organism->org_domain() ne "Eukaryota"))
     {
         print "# Failed to complete run for ".$organism->org_menu_name()." (Db: ".$organism->db_name().")\n----------------------------\n";
         next;
     }
@@ -474,9 +474,9 @@
     "            --pfam    :  Load PFAM information\n",
     "            --scanpfam:  Search all proteins with PFAM models (>12 hours per species)\n",
     "            --kegg    :  Load KEGG information\n",
     "            --gbrna   :  Load Genbank RNAs track\n",
-    "            --trna    :  Load tRNAscan-SE track\n",
+    "            --trnas   :  Load tRNAscan-SE track\n",
     "            --snorna  :  Load C/D guide snoRNAs track\n",
     "            --rfam    :  Load Rfam track\n",
     "            --rrnablat :  Load rRNA Blat hit track\n",
     "            --trnablat :  Load tRNA Blat hit track\n",