src/hg/hgc/lowelab.c 1.41

1.41 2010/01/07 02:56:48 pchan
add code to display GtRNAdb links for tRNAs track
Index: src/hg/hgc/lowelab.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/lowelab.c,v
retrieving revision 1.40
retrieving revision 1.41
diff -b -B -U 4 -r1.40 -r1.41
--- src/hg/hgc/lowelab.c	9 Nov 2009 19:20:29 -0000	1.40
+++ src/hg/hgc/lowelab.c	7 Jan 2010 02:56:48 -0000	1.41
@@ -832,9 +832,15 @@
     printf("<B>tRNA Isotype: </B> %s<BR>\n",trna->aa);
     printf("<B>tRNA anticodon: </B> %s<BR>\n",trna->ac);
     printf("<B>tRNAscan-SE score: </B> %.2f<BR>\n",trna->trnaScore);
     printf("<B>Intron(s): </B> %s<BR>\n",trna->intron);
-
+    if (!sameString(trna->genomeUrl, ""))
+    {
+        printf("<B>Summary of all genomic tRNA predictions:</B> "
+                 "<A HREF=\"%s\" TARGET=_blank>Link</A><BR>\n", trna->genomeUrl);
+        printf("<B>tRNA alignments:</B> "
+                 "<A HREF=\"%s\" TARGET=_blank>Link</A><BR>\n", trna->trnaUrl);
+    }
     printf("<BR><B>Genomic size: </B> %d nt<BR>\n",trna->chromEnd-trna->chromStart);
     printf("<B>Position:</B> "
        "<A HREF=\"%s&db=%s&position=%s%%3A%d-%d\">",
        hgTracksPathAndSettings(), database, trna->chrom, trna->chromStart+1, trna->chromEnd);