src/hg/makeDb/doc/gasAcu1.txt 1.42

Index: src/hg/makeDb/doc/gasAcu1.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/gasAcu1.txt,v
retrieving revision 1.41
retrieving revision 1.42
diff -b -B -U 4 -r1.41 -r1.42
--- src/hg/makeDb/doc/gasAcu1.txt	23 Dec 2009 19:09:24 -0000	1.41
+++ src/hg/makeDb/doc/gasAcu1.txt	9 Jan 2010 00:28:46 -0000	1.42
@@ -2770,8 +2770,15 @@
     featureBits gasAcu1 chainTetNig2Link >&fb.gasAcu1.chainTetNig2Link.txt
     cat fb.gasAcu1.chainTetNig2Link.txt
     #	134497679 bases of 446627861 (30.114%) in intersection
 
+    #	and finish the downloads
+    time nice -n +19 doBlastzChainNet.pl -verbose=2 \
+	`pwd`/DEF \
+	-noLoadChainSplit -chainMinScore=2000 -chainLinearGap=medium \
+	-workhorse=hgwdev -smallClusterHub=memk -bigClusterHub=swarm \
+	-continue=download > downloads.log 2>&1
+
     mkdir /hive/data/genomes/tetNig2/bed/blastz.gasAcu1.swap
     cd /hive/data/genomes/tetNig2/bed/blastz.gasAcu1.swap
     time nice -n +19 doBlastzChainNet.pl -verbose=2 \
 	/hive/data/genomes/gasAcu1/bed/lastzTetNig2.2009-08-10/DEF \