src/hg/encode/DAFs/YDHChipSeqInput.daf 1.2
1.2 2010/01/11 17:45:07 tdreszer
Inputs have replicates
Index: src/hg/encode/DAFs/YDHChipSeqInput.daf
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/encode/DAFs/YDHChipSeqInput.daf,v
retrieving revision 1.1
retrieving revision 1.2
diff -b -B -U 1000000 -r1.1 -r1.2
--- src/hg/encode/DAFs/YDHChipSeqInput.daf 22 Sep 2009 00:12:34 -0000 1.1
+++ src/hg/encode/DAFs/YDHChipSeqInput.daf 11 Jan 2010 17:45:07 -0000 1.2
@@ -1,33 +1,33 @@
# Data Agreement File for Yale ChipSeq project $Revision$
# This file specifies the data agreement between your lab and
# the DCC. It should not be changed unilaterally.
# Lab and general info
grant Snyder
lab Yale
dataType ChIPseq
variables cell, antibody
assembly hg18
dafVersion 1.1
dataVersion 1
medianFragmentLength 200
- validationSettings validateFiles.tagAlign:mmCheckOneInN=100,mismatches=3,nMatch
+ validationSettings validateFiles.tagAlign:mmCheckOneInN=100,mismatches=3,nMatch,matchFirst=32
# # Track/view definition
view Signal
longLabelPrefix TFBS, Yale/UCD/Harvard ChIP-seq Signal
type bedGraph 4
hasReplicates no
required yes
view Alignments
longLabelPrefix TFBS, Yale/UCD/Harvard ChIP-seq Alignments
type tagAlign
- hasReplicates no
+ hasReplicates yes
required yes
view RawData
type fastq
- hasReplicates no
+ hasReplicates yes
required yes