src/hg/overlapSelect/chromAnn.c 1.16
1.16 2010/01/30 01:13:59 markd
allow specifying location of name when specifying column indices so that -statsOutput is useful
Index: src/hg/overlapSelect/chromAnn.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/overlapSelect/chromAnn.c,v
retrieving revision 1.15
retrieving revision 1.16
diff -b -B -U 4 -r1.15 -r1.16
--- src/hg/overlapSelect/chromAnn.c 31 Jul 2009 18:09:23 -0000 1.15
+++ src/hg/overlapSelect/chromAnn.c 30 Jan 2010 01:13:59 -0000 1.16
@@ -509,11 +509,12 @@
char **rawCols = (car->opts & chromAnnSaveLines) ? rowReaderCloneColumns(catr->rr) : NULL;
struct coordColVals colVals = coordColParseRow(&catr->cols, catr->rr);
-struct chromAnn *ca = chromAnnNew(colVals.chrom, colVals.strand, NULL, rawCols,
+struct chromAnn *ca = chromAnnNew(colVals.chrom, colVals.strand, colVals.name, rawCols,
strVectorWrite, strVectorFree);
chromAnnBlkNew(ca, colVals.start, colVals.end);
+coordColsValsRelease(&colVals);
return ca;
}
static void chromAnnTabReaderFree(struct chromAnnReader **carPtr)