src/hg/instinct/hgGeneset/makefile 1.3
1.3 2010/01/28 22:59:08 jsanborn
added clustering
Index: src/hg/instinct/hgGeneset/makefile
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/instinct/hgGeneset/makefile,v
retrieving revision 1.2
retrieving revision 1.3
diff -b -B -U 1000000 -r1.2 -r1.3
--- src/hg/instinct/hgGeneset/makefile 21 Jan 2010 23:51:13 -0000 1.2
+++ src/hg/instinct/hgGeneset/makefile 28 Jan 2010 22:59:08 -0000 1.3
@@ -1,50 +1,50 @@
include ../../../inc/common.mk
L += $(MYSQLLIBS) -lm
MYLIBDIR = ../../../lib/${MACHTYPE}
MYLIBS = $(MYLIBDIR)/jkhmap.a $(MYLIBDIR)/jkhgap.a $(MYLIBDIR)/jkweb.a
Gplusplus=g++
A = hgGenesets
-O = hgGenesets.o bioIntDb.o drawingCode.o trashDirMD5.o
+O = hgGenesets.o bioIntDb.o drawingCode.o trashDirMD5.o hgStats.o cluster.o
H = hgGenesets.h bioIntDb.h
#O = hgHeatmap2.o drawingCode.o hgChromGraph.o trashDirMD5.o hgSessions.o hgGenesets.o hgAnnotations.o hgUsers.o hgToolTip.o hgCircleMaps.o
A2 = populateDb
O2 = populateDb.o bioIntDb.o bioIntDriver.o createTables.o
H2 = bioIntDb.h
A3 = hgHeatmapCustomUpload
O3 = hgHeatmapCustomUpload.o trashDirMD5.o hgUsers.o
A4 = setCohorts
O4 = setCohorts.o bioIntDb.o createTables.o
H4 = bioIntDb.h
HGFRONTEND = /usr/local/apache/htdocs/hgGenesets
include ../../../inc/cgi_build_rules.mk
my::
rsync -a --exclude=CVS/ --delete frontend/* ${HGFRONTEND}-${USER}/
alpha::
rsync -rlD --exclude=CVS/ --delete frontend/* ${HGFRONTEND}/
compile: $O
${Gplusplus} ${COPT} $O ${MYLIBS} ${L}
mv ${AOUT} $A${EXE}
customUpload: ${O3}
${Gplusplus} ${O3} ${MYLIBS} ${L}
mv ${AOUT} ${A3}${EXE}
populateDb: ${O2} ${H2} ${MYLIBS}
${CC} ${COPT} ${O2} ${MYLIBS} ${L}
mv ${AOUT} ${A2}${EXE}
setCohorts: ${O4} ${H4}
${CC} ${COPT} ${O4} ${MYLIBS} ${L}
mv ${AOUT} ${A4}${EXE}