hartera: changes by file

review to branch (2010-01-26 to 2010-02-02) v224

• src/hg/makeDb/doc/hg18.txt
  • 1.396 lines changed: 24, context: html, text, full: html, text
    Renamed tables and added trackDb entry for the CRG mappability subtracks of the ENCODE Mapability track.
• src/hg/makeDb/doc/hg19.txt
  • 1.77 lines changed: 76, context: html, text, full: html, text
    Re-loading new data for the genomic segmental duplications track - in progress.
  • 1.76 lines changed: 27, context: html, text, full: html, text
    Renamed tables and added trackDb entry for the CRG mappability tracks as part of an ENCODE Mapability track.
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.849 lines changed: 1, context: html, text, full: html, text
    Moved the tag of subGroup1 for the CRG track.
  • 1.848 lines changed: 5, context: html, text, full: html, text
    Added wgEncode prefix to CRG Mapability subtrack table names for consistency.
  • 1.847 lines changed: 52, context: html, text, full: html, text
    Added subtracks for CRG's GEM Mapability data to the Mapability track.
• src/hg/makeDb/trackDb/human/hg19/trackDb.enc.ra
  • 1.1 lines changed: 0, context: html, text, full: html, text
    Created new genome-wide ENCODE trackDb.ra for hg19. Added Mapability track.
• src/hg/makeDb/trackDb/human/hg19/trackDb.ra
  • 1.87 lines changed: 45, context: html, text, full: html, text
    Added include for new genome-wide ENCODE trackDb.ra file and moved Mapability track to that file.
  • 1.86 lines changed: 44, context: html, text, full: html, text
    Added an ENCODE Mapability track with data from CRG's GEM Mapper aligner.