kate: changes by file

review to branch (2010-01-26 to 2010-02-02) v224

• src/hg/encode/encodeValidate/doEncodeReport.pl
  • 1.14 lines changed: 27, context: html, text, full: html, text
    Fixes to lab handling and NHGRI factor reporting
  • 1.13 lines changed: 26, context: html, text, full: html, text
    Add support for additional NHGRI reporting fields
  • 1.12 lines changed: 11, context: html, text, full: html, text
    Tweak around trackDb insconsistencies
• src/hg/encode/encodeValidate/doReport.csh
  • 1.1 lines changed: 0, context: html, text, full: html, text
    Wrapper for reporting, suitable for cron use, but still has some user-specific stuff
• src/hg/encode/encodeValidate/manual.all.txt
  • 1.1 lines changed: 0, context: html, text, full: html, text
    Temp manual report for certain data types
• src/hg/encode/encodeValidate/config/cv.ra
  • 1.205 lines changed: 1, context: html, text, full: html, text
    Add label for reporting cosmetics
  • 1.202 lines changed: 8, context: html, text, full: html, text
    Unify RNA-seq here for reporting -- will do for trackDb when convenient
• src/hg/encode/encodeValidate/config/pi.ra
  • 1.12 lines changed: 36, context: html, text, full: html, text
    Add synonmous entries for labs to accomodate inconsistent DAFs; Distinguish mouse labs
  • 1.11 lines changed: 1, context: html, text, full: html, text
    Tweak for consistency
• src/hg/makeDb/trackDb/human/hg18/trackDb.wgEncode.ra
  • 1.856 lines changed: 2, context: html, text, full: html, text
    Fix lab and datatype metadata for Hannon lab tracks (short RNA)
  • 1.855 lines changed: 110, context: html, text, full: html, text
    Fix grant metadata in Caltech tracks
  • 1.844 lines changed: 1, context: html, text, full: html, text
    Tweak metadata for reporting
  • 1.843 lines changed: 1, context: html, text, full: html, text
    Fix typo in freeze