src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.48

1.48 2010/01/26 03:28:45 rhead
Removing release alphas on chainNetMonDom tracks. Also changing color to black, to make the chain longLabels show up against white.
Index: src/hg/makeDb/trackDb/trackDb.chainNet.ra
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/trackDb/trackDb.chainNet.ra,v
retrieving revision 1.47
retrieving revision 1.48
diff -b -B -U 4 -r1.47 -r1.48
--- src/hg/makeDb/trackDb/trackDb.chainNet.ra	25 Jan 2010 22:15:52 -0000	1.47
+++ src/hg/makeDb/trackDb/trackDb.chainNet.ra	26 Jan 2010 03:28:45 -0000	1.48
@@ -1333,9 +1333,8 @@
         longLabel $o_Organism ($o_date/$o_db) Alignment Net
         type netAlign loxAfr1 chainLoxAfr1
 
 track chainNetMonDom1
-release alpha
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
@@ -1343,10 +1342,10 @@
 visibility hide
 group compGeno
 noInherit on
 priority 191
-color 100,50,0
-altColor 255,240,200
+color 0,0,0
+altColor 255,255,0
 type bed 3
 sortOrder view=+
 matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
 matrixHeader A, C, G, T
@@ -1363,9 +1362,8 @@
     subTrack chainNetMonDom1
     spectrum on
 
         track chainMonDom1
-        release alpha
         subTrack chainNetMonDom1Viewchain
         subGroups view=chain
         shortLabel $o_Organism Chain
         longLabel $o_Organism ($o_date/$o_db) Chained Alignments
@@ -1377,17 +1375,15 @@
     visibility full
     subTrack chainNetMonDom1
 
         track netMonDom1
-        release alpha
         subTrack chainNetMonDom1Viewnet
         subGroups view=net
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date/$o_db) Alignment Net
         type netAlign monDom1 chainMonDom1
 
 track chainNetMonDom4
-release alpha
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date/$o_db), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
@@ -1395,10 +1391,10 @@
 visibility hide
 group compGeno
 noInherit on
 priority 191
-color 100,50,0
-altColor 255,240,200
+color 0,0,0
+altColor 255,255,0
 type bed 3
 sortOrder view=+
 matrix 16 91,-90,-25,-100,-90,100,-100,-25,-25,-100,100,-90,-100,-25,-90,91
 matrixHeader A, C, G, T
@@ -1415,9 +1411,8 @@
     subTrack chainNetMonDom4
     spectrum on
 
         track chainMonDom4
-        release alpha
         subTrack chainNetMonDom4Viewchain
         subGroups view=chain
         shortLabel $o_Organism Chain
         longLabel $o_Organism ($o_date/$o_db) Chained Alignments
@@ -1429,9 +1424,8 @@
     visibility full
     subTrack chainNetMonDom4
 
         track netMonDom4
-        release alpha
         subTrack chainNetMonDom4Viewnet
         subGroups view=net
         shortLabel $o_Organism Net
         longLabel $o_Organism ($o_date/$o_db) Alignment Net