src/hg/hgc/hgc.c 1.1592

Index: src/hg/hgc/hgc.c
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/hgc/hgc.c,v
retrieving revision 1.1591
retrieving revision 1.1592
diff -b -B -U 4 -r1.1591 -r1.1592
--- src/hg/hgc/hgc.c	22 Jan 2010 22:23:19 -0000	1.1591
+++ src/hg/hgc/hgc.c	22 Jan 2010 23:43:18 -0000	1.1592
@@ -21174,9 +21174,9 @@
     char *fr = cloneString(el->alleleFreq);
     char *sc = cloneString(el->alleleScores);
     int i = 0;
     printPos(el->chrom, el->chromStart, el->chromEnd, "+", TRUE, el->name);
-    printf("Alleles are shown as in plus strand<br>\n");
+    printf("Alleles are relative to forward strand of reference genome:<br>\n");
     printf("<table border=1 cellpadding=3><tr><th>Allele</th><th>Frequency</th><th>Quality Score</th></tr>\n");
     chopByChar(name, '/', all, el->alleleCount);
     chopByChar(fr, ',', freq, el->alleleCount);
     chopByChar(sc, ',', score, el->alleleCount);
@@ -22782,15 +22782,11 @@
          sameString("pgYri", track)    ||
          sameString("pgCeu", track)    ||
          sameString("pgChb", track)    ||
          sameString("pgJpt", track)    ||
-         sameString("pgYoruban1", track) ||
-         sameString("pgYoruban2", track) ||
-         sameString("pgYoruban3", track) ||
-         sameString("pgNA12878", track) ||
-         sameString("pgNA12891", track) ||
-         sameString("pgNA12892", track) ||
-         sameString("pgNA19240", track) ||
+	 sameString("pgSjk", track)    ||
+	 startsWith("pgYoruban", track) ||
+	 (startsWith("pgNA", track) && isdigit(track[4])) ||
          sameString("hbPgTest", track) ||
          sameString("hbPgWild", track) ||
 	 sameString("pgYh1", track) ||
          sameString("pgTest", track) )