kuhn: changes by commit
switch to grouped by file view, user index
branch to review (2010-01-19 to 2010-01-26) v224
- moved all calJac1 chains and nets to composite and dropped individual tracks
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.47 - lines changed: 0, context: html, text, full: html, text
- src/hg/makeDb/trackDb/chimp/trackDb.ra 1.28 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra 1.45 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/trackDb.ra 1.34 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/trackDb.ra 1.497 - lines changed: 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.ra 1.184 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/trackDb.ra 1.41 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/orangutan/trackDb.ra 1.9 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/platypus/ornAna1/trackDb.ra 1.18 - lines changed: 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/platypus/trackDb.ra 1.13 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rhesus/trackDb.ra 1.19 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.39 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.584 - lines changed: 26, context: html, text, full: html, text
- fixed getAssemblies.csh to work with RR machines and several other programs that it depends on. it broke when we went to a single mysql machine and genbank dumps only grab from hgnfs1
- src/utils/qa/checkMachineName.csh 1.6 - lines changed: 1, context: html, text, full: html, text
- src/utils/qa/getAssemblies.csh 1.23 - lines changed: 38, context: html, text, full: html, text
- src/utils/qa/getRRdatabases.csh 1.12 - lines changed: 11, context: html, text, full: html, text
- src/utils/qa/getRRtables.csh 1.6 - lines changed: 10, context: html, text, full: html, text
- removed checking for multiple RR machines since we've gone to single mysql database
- src/utils/qa/syncAday.csh 1.10 - lines changed: 4, context: html, text, full: html, text
- dropped track blocks for chain and netPonAbe1, as no assembly has these tracks
- src/hg/makeDb/trackDb/trackDb.ra 1.586 - lines changed: 22, context: html, text, full: html, text
- moved all ponAbe2 chains and nets to composite and dropped individual tracks
- src/hg/makeDb/trackDb/marmoset/trackDb.ra 1.9 - lines changed: 5, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.ra 1.186 - lines changed: 13, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.26 - lines changed: 10, context: html, text, full: html, text
- src/hg/makeDb/trackDb/platypus/ornAna1/trackDb.ra 1.19 - lines changed: 9, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rhesus/trackDb.ra 1.20 - lines changed: 9, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.43 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.587 - lines changed: 26, context: html, text, full: html, text
- made graph.csh to draw a bar graph from a two-column file and added option for countPerChrom.csh to use it
- src/utils/qa/countPerChrom.csh 1.14 - lines changed: 46, context: html, text, full: html, text
- src/utils/qa/graph.csh 1.1 - lines changed: 22, context: html, text, full: html, text
- src/utils/qa/makefile 1.117 - lines changed: 1, context: html, text, full: html, text
- forgot to implement configurable bar length after adding option in usage statement
- src/utils/qa/graph.csh 1.2 - lines changed: 5, context: html, text, full: html, text
- added formatting for variable first column width
- src/utils/qa/graph.csh 1.3 - lines changed: 17, context: html, text, full: html, text
- added support for second set of data in histogram
- src/utils/qa/countPerChrom.csh 1.15 - lines changed: 39, context: html, text, full: html, text
- moved all panTro1 chains and nets to composite and dropped individual tracks. only hg17 and mm7 on RR
- src/hg/makeDb/trackDb/human/hg17/trackDb.chainNet.ra 1.11 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg17/trackDb.ra 1.437 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.454 - lines changed: 12, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm7/trackDb.chainNet.ra 1.9 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.chainNet.ra 1.28 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.ra 1.187 - lines changed: 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.44 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.589 - lines changed: 25, context: html, text, full: html, text
- moved all panTro2 chains and nets to composite and dropped individual tracks
- src/hg/makeDb/trackDb/chicken/galGal2/trackDb.ra 1.75 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/canFam2/trackDb.ra 1.46 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/trackDb.ra 1.36 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.455 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/marmoset/trackDb.ra 1.10 - lines changed: 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm7/knownGene.html 1.10 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm8/knownGene.html 1.7 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.ra 1.188 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.27 - lines changed: 10, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/trackDb.ra 1.42 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/orangutan/trackDb.ra 1.10 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rat/rn4/trackDb.ra 1.49 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rhesus/rheMac2/trackDb.ra 1.52 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.45 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.590 - lines changed: 26, context: html, text, full: html, text
- src/hg/makeDb/trackDb/zebrafish/danRer4/trackDb.ra 1.41 - lines changed: 28, context: html, text, full: html, text
- moved all rheMac2 chains and nets to composite and dropped individual tracks
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.48 - lines changed: 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/chimp/trackDb.ra 1.29 - lines changed: 26, context: html, text, full: html, text
- src/hg/makeDb/trackDb/dog/trackDb.ra 1.37 - lines changed: 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg17/trackDb.ra 1.438 - lines changed: 24, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg18/trackDb.ra 1.456 - lines changed: 28, context: html, text, full: html, text
- src/hg/makeDb/trackDb/marmoset/trackDb.ra 1.11 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/trackDb.ra 1.189 - lines changed: 7, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.28 - lines changed: 10, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rat/trackDb.ra 1.68 - lines changed: 14, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.46 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.591 - lines changed: 26, context: html, text, full: html, text
- moved all galGal22 chains and nets to composite and dropped individual tracks
- src/hg/makeDb/trackDb/chimp/panTro2/trackDb.ra 1.49 - lines changed: 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg16/trackDb.ra 1.583 - lines changed: 18, context: html, text, full: html, text
- src/hg/makeDb/trackDb/human/hg17/trackDb.ra 1.439 - lines changed: 16, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/monDom4/trackDb.chainNet.ra 1.9 - lines changed: 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/trackDb.ra 1.43 - lines changed: 17, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.47 - lines changed: 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.592 - lines changed: 27, context: html, text, full: html, text
- src/hg/makeDb/trackDb/xenTro/xenTro1/trackDb.ra 1.42 - lines changed: 17, context: html, text, full: html, text
- moved all galGal3 chains and nets to composite and dropped individual tracks
- src/hg/makeDb/trackDb/fugu/trackDb.ra 1.71 - lines changed: 26, context: html, text, full: html, text
- src/hg/makeDb/trackDb/horse/trackDb.ra 1.23 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/lizard/trackDb.ra 1.9 - lines changed: 6, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.chainNet.ra 1.5 - lines changed: 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/opossum/monDom5/trackDb.ra 1.29 - lines changed: 17, context: html, text, full: html, text
- src/hg/makeDb/trackDb/rat/trackDb.ra 1.69 - lines changed: 14, context: html, text, full: html, text
- src/hg/makeDb/trackDb/stickleback/trackDb.ra 1.25 - lines changed: 27, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.chainNet.ra 1.49 - lines changed: 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/trackDb.ra 1.594 - lines changed: 26, context: html, text, full: html, text
- src/hg/makeDb/trackDb/zebraFinch/trackDb.ra 1.9 - lines changed: 22, context: html, text, full: html, text
switch to grouped by file view, user index