src/hg/makeDb/doc/calJac1.txt 1.22

Index: src/hg/makeDb/doc/calJac1.txt
===================================================================
RCS file: /projects/compbio/cvsroot/kent/src/hg/makeDb/doc/calJac1.txt,v
retrieving revision 1.21
retrieving revision 1.22
diff -b -B -U 4 -r1.21 -r1.22
--- src/hg/makeDb/doc/calJac1.txt	25 Nov 2009 21:48:38 -0000	1.21
+++ src/hg/makeDb/doc/calJac1.txt	12 Feb 2010 23:42:33 -0000	1.22
@@ -1652,5 +1652,17 @@
 by a single Makefile. This is available from:
    svn+ssh://hgwdev.cse.ucsc.edu/projects/compbio/usr/markd/svn/projs/transMap/tags/vertebrate.2009-09-13
 
 see doc/builds.txt for specific details.
+
 ############################################################################
+# LIFTOVER TO calJac3 (DONE - 2010-02-11 - Hiram )
+    mkdir /hive/data/genomes/calJac1/bed/blat.calJac3.2010-02-11
+    cd /hive/data/genomes/calJac1/bed/blat.calJac3.2010-02-11
+    # -debug run to create run dir, preview scripts...
+    doSameSpeciesLiftOver.pl -debug calJac1 calJac3
+    # Real run:
+    time nice -n +19 doSameSpeciesLiftOver.pl -verbose=2 \
+	-bigClusterHub=swarm -dbHost=hgwdev -workhorse=hgwdev \
+	 calJac1 calJac3 > do.log 2>&1
+    #	real    36m16.693s
+#############################################################################